| Id Trinity | TRINITY_DN50954_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_388233 |
| Sequence | TTCATTTTCCTCCAAAACTCAACTCACAATCACGATCTTTAAAAACATCATCAAAATAATGTAATAAATGAAAGATGTGTTAGTGAGATGATGCCACATT GCATTTTCTTGTAGGGTACTCTACCCTTTCTCTTGTGATATCTCCCTTTCTTTCTTAACTTGAAGTTCCTTTCACTTTACTTTTAAGAGACAGGTACATG CACACACATACACATTCATTACAAAGAGAGAAATGAGTTCATCCTCAGGTCAAAGCAGCGGCTATGATCTTTCTTTTAAGATCTTGTTGATTGGTGATTC TGCTGTTGGAAAAAGTAGCTTACTTGTTAGCTTCATTTCCAACCCTGTTGAAGATCTTGCACCTACCATTGGTGTTGATTTTAAGATCAAAACATTTACA GTAGGTGGGAAGAGATTAAAACTAACAATCTGGGACACTGCTGGGCAAGAAAGATTCAGGACTCTAACAAGTTCTTACTATAGAGGAGCACAAGGAATCA TTCTTGTTTATGATGTCACAAGGAGAGAAACCTTTACAAATTTGTCAGAAGTTTGGTCAAAAGAATTGGAACTCTATTCAACTAATCATGATTGCGTGAA GATGCTAGTTGGAAATAAAGTTGATAAAGTAAGTTTTGTGATCTAGTAGTGTGCTTGGATATGTAACCCTGAGGAATGAATTTATAGTTGTCTCCAAATC TTGCATCATAAAATGGTTGCAAAATATATTAAAAATGGCATACCAATGAACAAGTCTCTCACCTAGTGGGATCAGAAAGGGCATATGCACGCAACTTACC CTTGTAACTGAAGAGAATTTCTACAATTTGAACTCGTGACCTTCAGGTTGCAAAATATATTGAAATAAAATGAGATGTATGGGTTTGATATTATCTGCAC TAAGGTAACAAAACAAAATTCAGGATTAGTCTTCCACATGTCTCTTTTCTCAGTTTTATTGTATTCTTTATTTCCTTCTTGGCTGTGAATTTGTCTATAG AATTAGTCTTTCTAAGTTTTCATCCAATATTCATATCATGAAAAAATTATGACATCTTCATGATCTCAAGTGAGTAACTTTAATTATGTCCTCTAACTTA GGAACCAACTAAAATTGATCAAACTAGGTCCTTGTCATCGTTGGCATATATACACATGTATATGAATCCATCAATCGGTTCCCTCAAGGTTTTAGTTAAA GAGATGGTGTTCGACTTGCTTTTATTGTTCTACTTCAAGTCCTTTGGTTTTAGATCTCCCCGGTGTCAACTCAGTGAAGCACGTGCTTATGAATTCAGTT CAATGTCAACTCAGGGGCACTTGGGAGAGCTTTTTAGTTGGACAATGCAAATCCCATGAGAATAGTTTATGACATTCTTATAAGCTCTTCTTAGCTTATC AGAGAAGCTCATGAAAATATGTTTTTTTAGCTTATTGAAGAAGCACTTTATTGAACTATCTAGAACTCATTCTTATGTTGTCTAATACATGCATGCACTT AAGAGGGCACTGTTACATCATCTAGCATTGATGCCAATTCCCATTGTCACATTGGTTATGATCTTGAACACATGCTTTTGATTTCTTATGCAATCTAAAT TTGAAATAGAGACCTCAGATTTGTAGGGCTCTTATCTTGATATATTTCATTCATTAATTTATTAAATGGTTTATATTTCTCTATTATAGGATTGTGAAAG GGCTGTTAGCAGAGAAGAGGGTTTAGCTCTTGCGAAAGAGTTGGGGTGTTTGCTTTTTGAATGTAGTGCTAAAACTCGAGAAAATGTAGAGCGTTGCTTT GAGGAACTTGCTCTAAAGATAATGGAAGCTCCTAGTCTTTTGGAAGAAGGATCAACAGCAGCAGTTAAAAGGAATGTTTTAAAGCAGAAACAGGAATCTC ATTCATCCCAAAATGGTGGTTGTTGCTCTTAAAAAATGTGTTATCTTGTTCAAGTCCTGTATATGTAAGCTTCTTCCTTAGTTCCTTATTGCTTCAAATG TATTTTGGTTGCTTAACTAACTATCACAATGGACAAGTTGGCAACAATGAAGCCTATTAGCTTGTGTAAATTTGTTTGCCAATGAATACTGTATCATTTG TGTGACCTCCCTTACCAACCGGATTCTGATTGCATTTTTATTGCGCACATTGCGCCTAAGTAATCGAACAATTCGATTAAACCTATGCAGGAAAGAATTT TTTTTACTTCAAATTACTAGTTATGGGTATGCTGCTACTACTAACATGTCCTGCTCTTGGAAATTGAAAATGCAAGGTGGACATGCTTGTAAGTGTGTAG CCCATGCTTAGTAATCATAATTTGAGTAAGGAAAAGACTTCTCTATACCGATTTTGTCTCTGAAGTGACCAGGTAAGGGCATATATGTATTTACCTTTTA CTTGCTCACTTAGGATCTGTTTGCGAGTTGATTTTCAGAGGGTAATGAAGGGAAGGAAAAGGCTTGAGAACTATGAAATGCACTTGTAAAATGACTCTGA TGCCTTCCTTTTCCATTCCTTCCTCTCCAAAACTCTACTCGCAAACAGATCCTTAAGGACAAGCTCACTATGGAGGAGCCTTATCTATTGAGTAATGATA CTTGAGCAAAATTGTACTCACAAACTTGTACTAGTTATATAGGTGGCTTTGCCAAAATTCTGTGTTCATTCCCCACTTATTTCTCTTATATACTCATGTA GTCTTCTATGAAGTTTATACAGGCTTGTGAAACATGACAGTGCAATCAGCTAAACAGTTTGTTGGCAAACATAATTACAAATTTATAAGCAACATTTAGT TGGGATAAATAAAAGAGTGGCTACCTAATTCCTAACAAAGAATTGTATTGATGTACAACTTCTTCCTTTATTGTGAAATAAGGATAATTTATAGTATCTC TAAACCTTAATATACCTCCCAACAAGACTTTAGCCTAGTGGTGTAAGACCCCACTAGATCCCTAGAAAGATCTAAAGGTCAATAGTTCGATTCCTAGGAG TGACACTTGTGGGAGGGGCAATTATATACCTCCAAAGAGATTAACTTCTTATCCATAAGGTGAGGGGATAACCATGGTAGTATAAAAAAACCTTAATATA GCTGTATCAGTAGTTTGTAGGCAGTTTCTGAAGTATGATTGTGTAAGAAGCATCACTCAACTCAATATAATGCCTGCCAATCAATATTCAATGTACCCTA AATATCTGACTAAAAAAATCAATAACAAACAACTAATTTGCCTTTGAAAACTGTGCTCAACACCATAGAATTACATGGGAACACATGATGAAATGTCAGT AACTGCAAGAACCTATTAGCTGCAGCATGCTGGTTTCTGCATCATACTTGTTGAGGAAGTTAAGTCTTTGGCTTTACCAGGTTTACTGATCTTGATGGTT TGAGGCTAAAAAATAATGAAAAAGTCAAAAGTAGTGTAGAAAATCAATCCACTACTTAATCCAGAAAATGTGGAAGGGAAAAATGTACCTCAGATTTTGG ATCACCCTCAGCTAGTCTATGCTTTATGTCTCTTGATATCGAAAAGAAGATCTGTTCAACATTTAGATTTGTTTTGGCACTCTGCTCACAAAAGTTTCAA TCATCAAGGTGCAAAAGAATCAATGTCCAAGAGAAATGAATGCTCAACCCAAAAACGAAAACGAAAACCTTGTTTTAAACATTAAGGCCTAATGATGTCT AGGCCTTAATGTCTTTCAACAAGTGTATTAGAGTATAAATATACGTTGTTGTTGTTCAATTTTGTTGTACAAATAACAGGACTTGCATTATGCATTATAC TAACCGTCTCGAAAAATTTAATACCGTATTCATCAGCCACAGCCTGGCCTCTTGATGTTGGGACAGCCTATAATTAAATTCTAAAAGGATTCAGTTGAGA TATAACTGTCAAACAAGAACAGAGATCTGGTATCTCAAATCATGTATCATATACTGTTTCGTCCATGAAAACTTCTCATGTCAATTAAAAACACAATTTA G BLAST |
| Tissue | pods |
| Gene name | LI_gene_181271; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388233
| Blastp | Ras-related protein RABC2a from Arabidopsis with 88.06% of identity |
|---|---|
| Blastx | Ras-related protein RABC2a from Arabidopsis with 88.71% of identity |
| Eggnog | Ras-related protein(ENOG410XPD0) |
| Kegg | Link to kegg annotations (AT5G03530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426462.1) |
| Pfam | ADP-ribosylation factor family (PF00025.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |