| Id Trinity | TRINITY_DN50957_c0_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_389126 |
| Sequence | TATAATTTCTATGACTAACCATTAAAAAATAATAATATTTAAATATGAATGACAAATAATATAATAGACTTAAAATTCAAACTGAATTGGTATTTGCTTT TTTAAAACGGTGGAGAGTCGTAATAATAATGAATAAGAAAAAGGGCAGTGAGAGGATGTGTCGCGTGCTAAGGAAACCAATCTGCGGATTCGTGTTGTTG TACTTATCATGCACGTAACTATTCTGTTACACATTCAGTTACACGTTCACGACTATCACCAACCCTTTCTTCATCAATCAACGGCTCTCATTACTTTATA AACGAGCCTATCGTGACTTAAACTGGGTCACCCCTCATTCATCTACGGCTCATATTACATTTAAAACAATCAACGGTTCAAAATCATGGACACGTCATAT AGTTTTATCTGAATCGCTTAGCTGGCCCCACAGGGTTTTACACACATTACCAGATAACTTTTTCAACCTTTTTTGAGGTAAACATGGGAAACATGTTCAA TGTGGTTGTGTTGGGTTTGTGTTTGTCAACCCTGTTGTTTTGTCCGGTCTCATGTGCACCCAATGATGATGGGTTGCATAGGATTGGACTGAAAAAGATG AAATTGGATTCAGACCGAGGTGAGCGCTTGGTTTCTCATATGGGGTTCAAAGAAGCTTCAATTTTGAGCTCTCCCATTAGAAAATATCACCTTCAAAGCA ATGTCGTAGGAGCCGCGGACACTGATATTGTTGGATTAAAGAATTACTTAGATGCTCAATACTATGGTGAAATTTCTGTTGGTACCCCTCCTCAAAAGTT CACTGTAATTTTTGATACTGGTAGCTCTAATTTATGGGTTCCATCAGCTAGATGTTACTTATCGCTTGCATGTTACTTCCATGCGAAGTACAGGTCTAGG GAATCAAGTACCTTTAAGCCAAATGGGACTTCTGCTGCAATTCAATATGGCAGTGGAGCAATTTCTGGTTTCTTTAGCTATGACAATGTCAAAGTTGGTG ATGTAACTGTCAAGAACCAGATATTTATTGAAGCAACTAGAGAGCCTGGAGTTACATTTGTGGCAGCTAAGTTCGATGGTATTCTAGGACTTGGATTTCA AGAGATATCTGTTGGAAATGCTGTTCCAGTGTGGTACAATATGGTTGAGCAAGGTCTTGTTAAGGAACCACTATTTTCATTCTGGCTTAATCGTAATCCA AAAGAAGAGCAAGGAGGTGAGCTTGTTTTTGGTGGTGTTGATCCTGCTCACTTCAAAGGTGAACATACTTACGTGCCCGTGACACGAAAAGGATATTGGC AGTTTGACATGGGAGATGTACTTATTGGTGGTAAACCCACTGGATACTGTGCTAAAGATTGTTCAGCAATTGCAGACTCAGGGACCTCCTTGTTGGCAGG ACCAACGGTATGAATAAATGCTTGTCGATATAGGCTCCTATTTAGATTTATATTTCTGACTGGAATTTCTTGTCCTGTAAGGAATGCTTTTGACTAATTG AGAAAAGGTCTATCATAATGCAGACACAGGGACTTCAATGTGATTGCATTTTTTATATAACCAAATGAGGACAGATGTAGCAAATGCTTTTTACCACCTT GTTTCTATGATCAAATATGTGATTTTGTTCTTATAGGCTGTAATTACTATGATAAATCAAGCCATTGGAGCCTCTGGAGTTGCAAGCCAAGAATGCAAGG CTGTTGTTAACCAGTATGGACAAACAATCCTGGACTTGCTCTTCACTGATGTAAGAACCATTTTTAATTAACTGTTAGCATATTTTGGTTTATTTGATTC TTGTCCATTGTCATGTGTCATCTGACATTTGATCATCTTTCAAAATGAACTTTGTTTATGGTTTTCATTCGGCCCTGTAGGCACCACCAAAGAAGATCTG CTCCCAGATTGGATTATGCACCTTTGATGGGACTCACGGTGTTAGGCATGTCTCAAAAATATTATATACCTTATGTCAATCACTTAGAGATCTTAATATA TTTAATGTTCACTGAATGCCATTTTAGTGATGATTATTTGAGTTTTTCTTATAGTGCGGGTATTGAGAGTGTGGTAGACACGAACGAAAGGCAATCAAGC GGCGGCGCTCATGATGCTACTTGTACTGCTTGTGAGATGGCTGTTGTTTGGATGCAGAACCAGGTGAAGGAGAACCAGACGCAAGAGCGGATAATAGACT ACGTCAATGACCTTTGTGATAAACTGCCTAGCCCAATGGGACAATCATCTGTTGACTGTGGAAAGCTCTCATCAATGCCTAATGTTTCCTTCACCATTGG CGGAAAAACTTTTGACCTTGCCCCAGAGGAGGTATAATGTTCTCAAAACTACCTTATGAGTTATGATCCTTTCAGTGTCTTGTTTTCGATATCTCTCCGA ACCCCGAGTAGCTAGCCATTCCATTCAATGGAACTAATGTTAATACAAATAAATTCTTTAATCATTAAAGTAATATGCATCGTTAGTGTAAAACTATTAT TTTGACACGTGCACTTTCATTTTAAAACGCGGTAAATAACTATAAATTCCGATTTGTCAAAACATCATTGGAGCATGCCCTGTTCCATGTTTTATGTTGT CCTCATCCAGTTTTGTCTTTGGTTTCTTCAGTACGTACTCAAGGTGGGTGAAGGTCCTGCAGCTCAATGCATTAGTGGCTTTACTGCTTTGGATGTTCCT CCTCCGCGCGGCCCTCTCTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_181302; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_389126
| Blastp | Aspartic proteinase A3 from Arabidopsis with 66.45% of identity |
|---|---|
| Blastx | Aspartic proteinase A3 from Arabidopsis with 64.89% of identity |
| Eggnog | aspartic(ENOG410XNV7) |
| Kegg | Link to kegg annotations (AT4G04460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429923.1) |
| Pfam | Eukaryotic aspartyl protease (PF00026.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |