| Id Trinity | TRINITY_DN50957_c0_g1_i29 |
|---|---|
| Name Transcript | Ll_transcript_389138 |
| Sequence | CGAAAAACCCCCCACCCCTTCTTCATTCTTTCATCATCTACGGTTACAAATATATCAACGCTTTTTACACATTCAATAATACTTTTATTTTTAATCTCTT ACACCTGGCCCCACCTATTTTTACATACCCTCCCTTTTTCAGCGTTTAAATTCTCCACTCTTCATCAACTTTTTCTCATTTCTTGCATTCCTTCTCTTAT CACCCTCCACAATTTGGTAAACATGGGGAACATGTTCAATTTTGTGTTGGGTTTATGTCTTTCAACATTGTTGTTTTCTATGGTCTCTTGTGCACCCAAT GATGATGGGTTGCAGTTGCATAGGATTGGGCTGAAAAAAGTTAAATTGGATTCGAACCCAGACGAGCGCATAGCCGCTCGTCTCGGGTTCAAGGGAGCTG CAATCTTGAGCTCTGTTATTAGAAAGTATCACCTGCAAAACAATCTCCTTGGAGCCGGGGAAACCGACATTGTTGGATTAAAGAATTACTTGGATGCTCA GTACTATGGTGAAATTTCTGTTGGTACCCCTGCTCAGAAGTTCACTGTCATTTTTGACACTGGTAGCTCTAATTTGTGGGTGCCATCAACTAAATGTTAC TTCTCAGTTGCATGCTTCTTCCATGCCAAGTATAAGTCTAGCCAATCTAGTAGTTACAAGGCAAACGGGACTTCTGCTGCAATTCAATATGGGACCGGAG CAATTTCTGGTTTCTTTAGCTATGACGATGTCAAAGTTGGTGATGTACTTGTCAAGAACCAGATATTTATTGAAGCAACTAAAGAGCCTGGAGTTACATT TGTAGCAGCTAAGTTTGATGGTATCCTAGGACTTGGGTTTCAAGAGATATCAGTTGGAAATGCTGTTCCAGTGTGGTACAGTATGGTTCAACAAGGCCTT GTTAAGGAACCAGTGTTTTCATTCTGGCTTAATCGTAAACCAGAAGAAGAGCAAGGCGGAGAAATTGTTTTTGGTGGTGTTGATCCGGCTCACTTCAAAG GTGAACATACTTACGTGCCCGTGACACGAAAAGGATATTGGCAGTTTGACATGGAAGATGTACTTATTGGTGGTAAACCCACTGGATATTGTGCCAAAGA CTGTTCAGCTATTGCAGACTCAGGGACTTCTTTGTTGGCAGGTCCAACGGCTGTAATTACTATGATAAATCAAGCTATTGGAGCATCTGGAGTTGCAAGC CAAGAATGCAAGTCTGTTGTTGACAAGTATGGACAAACAATCCTGGACTTGCTTTTCTCCAATGCACCACCAAAGAAAATCTGCTCCCAAATTGGATTGT GCACCTTTGATGGGACTCACGGTGTTAGTATCGGTATTGAGAGTGTGGTGAATAAGAATGAAGGACAATCAAGTGGTGGAATTCATGACGCTACCTGTTC TGCGTGTGAGATGGCTGTTGTTTGGATGCAGAACCAGGTGAGTCAGAATCAGACACGAGAGCGGATAATAAGCTACATCAATGAGGTGAGTTGGTCTTAA TTTTGCTATTTAAGTATTCAAATTCGGCTTCTTGTCTTGACCTCAGCCTCATATGATTATGTTGCAGCTTTGTGATAAACTGCCGAGCCCAATGGGAGAA TCATCTGTTGACTGTGGAAAGCCCTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_181302; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_389138
| Blastp | Aspartic proteinase A2 from Arabidopsis with 68.61% of identity |
|---|---|
| Blastx | Aspartic proteinase from Cucurbita with 72.4% of identity |
| Eggnog | aspartic(ENOG410XNV7) |
| Kegg | Link to kegg annotations (AT1G62290) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426260.1) |
| Pfam | Eukaryotic aspartyl protease (PF00026.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |