Ll_transcript_388848

• Id Trinity: TRINITY_DN50958_c0_g1_i10
• Name Transcript: Ll_transcript_388848
• Sequence: CTAAATTCTAAAAAACCTTTAGCACTAAGTCAACGCTTCTCTCTCTCTTCACCTTCTTCTTTTTCTCAACTTCTTCATTCTTCACCCTCTACCACCACTT CTCACCATGAACAATCAGTTTTAACAACCTCCTCACTCATTTCTATATTCTATTCTATTTTCACTTGCTATGGGTAACGGCGTTGGAAAGCTAACCGTGT GTTTCACCGGTCGCCGGAAGCATCATGAAATACCCTCTTGTATAACGGAGCCACTAGACGAGGGTCTGGGTCACTCTTTCTGCTACGTTAGACCCGACCC GACTCGTTTATCTTCTTCAAAAGTCCATTCTGAAGAAACGACGACGTTCAGAACAATCTCTGGTGCGTCGGTGAGTGCTAACACTTCAACGCCACTCTCA ACCGCTTTCGTAGATTTATATTCATACGGTTCAATCGATAGAGCCGCGGCTTTCGAATCTTCAACTTCTTTCGCTTCTCTCCCTCTTCAACCAATCCCCA AAGGTTTAATAAACTCGGGTCCGTTCTCCGGTAGCGTAACCGGTTTTCCCGGTTCGGGTCCTCTCGAGAGAGGGTTTTTGTCCGGTCCGATAGAGCGTGG GTTCATGTCTGGTCCGATTGAAAAGGATGTTAACGGTTCGGATCAGTTTCAGAGAAGCTTCTCTCATGGTGGACTAGGTTTAGTGTTCAAACCTAGAAAG CAAAAGGGTCGTTGGATTCGGCTTCTTCAGAGAGCGATATCGAAGACTTTGTCTCGTGGACAAAAATCAATTGTTGCACCGATGAAAGGTGTGGTGGTGA AGGAACAAGAGTGGGTTGTTGTGGCGGAGAAGCAGAATCATAACGAGAATTTGATTGTGAATAGTTTGAATTTCAGTAGTGAGGGTAGTTTGGAAGACGA TGATTTGATGGAAAGTCAGAATCTTCAATGGGCTCAAGGGAAAGCAGGGGAGGATCGTGTCCATGTCGTGGTTTCGGAGGAACACGGTTGGATTTTTGTG GGGATTTACGATGGTTTCAATGGTCCTGATGCACCTGATTACCTTCTCTCGAATCTGTACACCTTTCTCCACAAAGAATTGAAGGGCTTGCTGTGGGATG ATAGTTCTGAACAAGTTAATGTGACGGAGAATCGGAATTTGGAAGTGCAAGAAGTTGATGTTGATGATTGTTCTCAGTGTTTTGATAATAATAATCGTCC TTGCACAAGTGGCGATGCTGCGAATTTTGATGATGGTTGCAAGAGAAAGAAGGTCAAGAGTCACAAGAATAAGTACAAAGGTGTTGCGAATAAATGGGAG GAGAATCAGAGAAGGTGGAAGTGTGAGTGGGATAGGGAAAGAGTGGAACTTGATAGAAGATTGAAGGAACAGTTAACTCAATTTAATTCCAGTGGGAAGA ATAATAGCTCAATTAACCATGTAGATGTGTTGGAAGCTCTTTCTAGGGCTTTGAGGAAAACTGAGGAGTCTTATTTGGATGTTGCTGATAAGATGGTGAT GGAGAATCCTGAATTGGCTTTGATGGGTTCGTGTGCGCTTGTGATGTTAATGAAGGGGGAGGATGTTTATGTGATGAATGTTGGAGATAGTAGAGCTGTG TTGGCACAAAAGGTGGAGCCTGATTATTGGCTTGGGAAGATTAGGCAGGACTTGGAGAGGATCAATGAAGAAACCATGAATGATCTCGATGAATCTTGGG ATGATGCTGATATATCAAGCTTGGTTCCCACTCTAAGTGCGCTCCAGCTTACCAAAGATCATAGTACTAGTGTTGAAGAAGAAGTCCAGAGAATAAAGAA CGAACACCCGGATGATCCTTGTGCAGTTGTAAATGATCGTGTTAAGGGTTCTCTGAAGGTTACGCGGGCATTTGGTGCTGGATTTCTCAAACAGCCCAAG TGGAACAACGCTCTTCTGGAGATGTTTAGAATAGACTACATAGGGACTTCTCCTTACATAAGCTGCCAACCATATCTAAAACACCACAGGTTAGGCCCTA AGGACAAATTTTTGATCCTATGCTCAGACGGTCTGTATCAATACATGTCAAACGAAGAAGCGGTTGCCGAAGTTGAGCTTTTCATCACATTGCAACCCGA GGGAGACCCTGCTCAGCATTTGGTTGAAGAAGTCTTATTTCGTGCTGCAAAGAAAGCAGGTATTACTAACAAGAATTTCATTTAAAAGATCTCATAATCC CATTTAAGGAACAATTGTCTGACTGAAATTTTCGCCTTCCTAATCCTCAGGTTTGGACTTCCATGAGTTGCTTGAAATTCCACAAGGCGATAGGCGTCGC TACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAAGGAAGGATATGGAGATCATGTGTATAAGTATAGCGAAAACCATATATCATATAAGAAAAGA GGGAGATGAGGACTATGCTACTGCCTAAGGGCCAGGCATTACCTTTTAGCTGTTTTCCCCTCTTCATGCTCACTATTTGTAAAATTGCACTAAGCACTGG GATAATGCCTAGCATTAGTTGTGCAATTCAGTAGGTGGTGAGGATTGTAAAGTTTTAAAAGCTGGATTTAGTTGATTATAACTCTCCTATAAAATTGTTA TTTTAATCATTCCTTAAAATCTTTTCATTGTGCATACAGCACTAAGATAGCACCCTCCATC
• Tissue: pods
• Gene name: LI_gene_181304;
• Additional information: details;

Expression of Ll_transcript_388848

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0.2
• PS2: 0
• PS3: 0.2
• PW1: 0
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388848

• Blastp: Probable protein phosphatase 2C 23 from Arabidopsis with 66.13% of identity
• Blastx: Probable protein phosphatase 2C 4 from Arabidopsis with 65.11% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT2G28890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454063.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;