| Id Trinity | TRINITY_DN50967_c0_g2_i14 |
|---|---|
| Name Transcript | Ll_transcript_388404 |
| Sequence | AAACTATTCCTTTATTTTTGTGAAGAAATATCTTTTCTCCTTCATTTTATCCTCCTCTGTTTTATTTTGTTCTGTTCATCCTCTGTCTTTTGAAGCTTTC AGAATTTCAATAGAACATTGGTCTATGGTGAAGAGTTTCATGAGATTACAATTTTTTCAATATATCCAAACATTTTTCTGAAATGGGTTTCACTCCTTTC AGGTTTTCACACACCCTTTTGATCAAGGTTGTTTGAGAAAAGCAAGAGTAAGAGGAAAAGGAAGAGCAACAAAAATGGCTTCTTCACAAGTTAAAGTTGC TTCCTCTTCACCCTTTGGTTGCGTTCTTAGGGATCGCAACCAAATTGATGGATGCAGAGAAAGTACTGTTTTCCAATTGAAAATGAAGAATTTTATCAAA GACCACCTTAACATGTCTGCAGACTCGAAAGCGAGTGAGAAGAACAACAATTTTTTCGAAGCATCAAAGAAGAATAATACTGGTAGCCTTCGCTTCATGA GAAGCAATCAGAACAGCAACAAGGATAAGCATGAGTCCTGTTTCGCCTCGTTGATTAGCCCAAAACACTCACGGCTTCTCGATCGATGGGCTGCGAGACA AGCCCGAGAGATGGTGTCAAATTTGGAGGATGAAGCAGAGTTGTTGGCAATGCCAAATTCAAACAACAACAACAGCAACAATGAAAACACTGACATGCTT CTAAGGACATATAGTAATTCTAGCTTTAGTGATGCCTATTCTGAAACCGCTGCTCTCGGTGCTTCTTCTCTTGTTCAGATATGGGAGAACAGGCTCAACA AATCCAATGGATCCAAACCAAACACACAAATTTCTTCCAATGCATCATTGGAAGAACTAAACAGAGGAGGTTCTGAGGCAGGGGAATCCTCTGATTCTTC GGATGATCACGAACCACTGGGGATTGAAGAACCGTTCTCCGAATGGGAATCTTATAGAACTGCACAGAGTAATCAATCTTCGCCACAAGCAAGTTTTTCT TCATTGGAGTCAGCAGAAAGTGACAGGGTCAGTGTTGCAGATATAGTCAAAAGGCTAACTTCTATAAAGCAAGGACAGAGTCCATCACATTCAATTGGTG AAGAAAATGGCAATAAAGGACGGAGTACCTGTGTGATATTTTTTCCTTGTATAGAGCATGAACGCGGTTTCTCGCCAGAGCTTTCAGCAAACAAAGCTTT TATCCCTCAGATTACTTGCTTGCCAAGAATTAGAGGTCGCCGAGCTTTTCATGATTTGCTTATGCATTTCGTGCGTGACCGGTATGGGGAGCTCAACAAT CTAGCAGAGCGTGGAGCAGTTTCAAAGTTCACACAAAGAGGGCGTATTCAGTCAGTGCTTCGGCTTCGGTTGTTGCAACGCGGGGTAGTGGCTAGTAATA AATCACACCAGAAATCAACAGCATCTGAAGTGAATAGAAAACCACAAGGATCTGCTATTATGCAACTAAGGGAAAGATTTAATAGCGGGGTTGGTAATAG AACAACAATGCCAATAGAAGTAGCTGAACCAAGAAGTCCTCATATACAATTTGATGCCTCTAGCACAACTAATGAACTGAGCAAAGACACTTGCAGTCTT ATTGTTAATAACACTACCAATCACTCTCCAGAATTCACACAAAAATCAGTGTCTCAAACGAGTGTCGATGGTCATAATAAGGAAGAAGCTCGACCATGTT CGAACACAACATTACAAGAAACATGTCTTGAGGTTGAGGTTCAGCATACTGACTCAAAAGAAACTGCTGAGGCAATTCCGTCCATGACTGAGTCAAATGT AAATAAGATGGAAGATGAGGTAGAGATAAGCAACCAAGAGTACACTATGGCTGACACAACTTATGATGAGACAGTAGACGAAGAGGAAGAGGCCATTAAC CAGCACTATGCTGAAAGCGATTATGGCAAGATAGTAGAAGAGGTTGAGGATATTGACATGAACTGTGATGAAAATAGTTACGACTGGATCAGCGAAATTT CTCGGCCTAGAAGCTACTGGGAAGAACGCAGACAAGAATGGTATAGGGAGATGCTTGACACCGAGTCTCACAATGAAGATATATGTAAGCTCCTTGAAAG AAGAACGGTGTCAACTTTCCTTTCTAGTGACTTCCGTGATAGAATGGATAGATTGATGCAGTCTCATAGAGGAACACAAATACATTTAGTCAGTAGACAA GATGAGGATGAAGACAACCAACTGTTTGTCTCATTTTTACAAGAACACCTGCGTCCAGCAAGAAATCTGCCGGAAGACGAAAGAGAGCGAGTGGAGGAGC AAGAAGAGGACGAAGAGACGAGAAATGAGGTAGAAGAAGAGCCGGAGGAAGATATAGAGGAAGAGGAGGAAGAGAATGTAGAGGAGCATGAGGGGGAGAG GTTGATCAGTAATTCATATCATGAAGTTTGTGATTATCTTAATCAATCCTCATTGCCGACTCAGTTGATAACATGGAGTGACAATGACAATGAAACTGGT GATGATATTCATAGAGCTGCATCTATATCCTCACCACCTTCTCAATCTCAGTCTTACTGTGAGGAAAGTCGACGAAACTTTTCATCCATGAATCATCATT CAATTGAAATGGAACTCATACATGATATGAGAGGGCATATGGAGCAACTTTATCGGGAGATTTCTGAGCTAAGGAAATCAATGGAGACCTGCATGGATAT GCAAATGCAAATGCAATTCCAACAATGCAAGAACCAACAGGTTCAATTAGTTAAAAATGAAGAGAAGAAGTCACATAACATGGGTCCAAAAAAAGGCAAC TGCTGTATTTGCTATGACATGAAAGTAGATGCACTTTTGTACAGGTGCGGGCACATGTGTACTTGCCTGAACTGTGCAAATGAGTTACAATGGAATAGTG GAAAATGTCCAATATGTAGAGCTAAAATAGTCGACGTCGTCCGTGTGTATGTTGATTTTTAAGCCTTTCTCAGTGGACACAATCTCACTCTAGAGGAATA TGGTTAGTCCTGAAGCTTGGTGCGATTGCTAAGTAACTATTTTACATCATTCATCATACATGACTTTCTCCTTTTCACATATACTTTCAAGTATATGAAG TTTTCCGGAGAAATGTGTTGGATGGCCTTCCTTGTACATTTGATAGCTTTAAATCTAACCTTTTTTCACTCTATGGTGTGTTCAGTATTACTCTTAGTCT TTCTGCTACAAAGATTTAAAGAGAGAATAAATAAGAAAACAGATACACACATGGAATTTTTGTTGGAGGTCAAAACAGCATGCCAGAAGACTCTGCAAAT TCATCAGCAACCATAAATTCAATCAAAATGTACAATTCCATTGTACCTGTCAGTCATCATATTTTGAAATCTGGGAGTGTTACCCTCACCCACATGTACT TGTGCATAGGACTGACAATGAACCGAACCTATTCGTTTGAAACTCGACTCGTTATTTAGTTCGACAAACTTGATTCATGAGCCGAACTTGAGATGGAAAT TGAGCTTATTAAATAAGCGACCTGAACTTGAGCTAAACACAATTTGATTCGTCAGGTTCTTAAGCTTGCTCGACATATACATGTATATATATAGATATAT ATATACTAATTTTTTATGTTTATTGTTATTATAGCAAGACAATGCATTATTTTTATGCTTATTATTAATATATATAAACAATGTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_181376; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388404
| Blastp | Protein neuralized from Sophophora with 54.72% of identity |
|---|---|
| Blastx | Protein neuralized from Sophophora with 53.7% of identity |
| Eggnog | protein ubiquitination(ENOG410ZMNG) |
| Kegg | Link to kegg annotations (Dmel_CG11988) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424862.1) |
| Pfam | Zinc finger, C3HC4 type (RING finger) (PF13920.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |