Ll_transcript_388384

• Id Trinity: TRINITY_DN50967_c0_g2_i3
• Name Transcript: Ll_transcript_388384
• Sequence: GTTACATTGCACTCTTCTTCACACCTTTGTTTATCTCTCACTCAAAACAAATCAATAACAACTTCCACCATTCTCCTTCACACCCTTCCCCCAAATTAAA CAAAAGAAAAATATCGAAGAGAGAGAAACAAAAAACCAGAAAATAGAGAATAAACTGATATTGTTTTATCACTTTCTCTCAATTTGTTCATATCCGTTAC ACAACAGAGCTTTAAATATAGGCAATGGAAAACGGCAATGAGGTTTTCACACACCCTTTTGATCAAGGTTGTTTGAGAAAAGCAAGAGTAAGAGGAAAAG GAAGAGCAACAAAAATGGCTTCTTCACAAGTTAAAGTTGCTTCCTCTTCACCCTTTGGTTGCGTTCTTAGGGATCGCAACCAAATTGATGGATGCAGAGA AAGTACTGTTTTCCAATTGAAAATGAAGAATTTTATCAAAGACCACCTTAACATGTCTGCAGACTCGAAAGCGAGTGAGAAGAACAACAATTTTTTCGAA GCATCAAAGAAGAATAATACTGGTAGCCTTCGCTTCATGAGAAGCAATCAGAACAGCAACAAGGATAAGCATGAGTCCTGTTTCGCCTCGTTGATTAGCC CAAAACACTCACGGCTTCTCGATCGATGGGCTGCGAGACAAGCCCGAGAGATGGTGTCAAATTTGGAGGATGAAGCAGAGTTGTTGGCAATGCCAAATTC AAACAACAACAACAGCAACAATGAAAACACTGACATGCTTCTAAGGACATATAGTAATTCTAGCTTTAGTGATGCCTATTCTGAAACCGCTGCTCTCGGT GCTTCTTCTCTTGTTCAGATATGGGAGAACAGGCTCAACAAATCCAATGGATCCAAACCAAACACACAAATTTCTTCCAATGCATCATTGGAAGAACTAA ACAGAGGAGGTTCTGAGGCAGGGGAATCCTCTGATTCTTCGGATGATCACGAACCACTGGGGATTGAAGAACCGTTCTCCGAATGGGAATCTTATAGAAC TGCACAGAGTAATCAATCTTCGCCACAAGCAAGTTTTTCTTCATTGGAGTCAGCAGAAAGTGACAGGGTCAGTGTTGCAGATATAGTCAAAAGGCTAACT TCTATAAAGCAAGGACAGAGTCCATCACATTCAATTGGTGAAGAAAATGGCAATAAAGGACGGAGTACCTGTGTGATATTTTTTCCTTGTATAGAGCATG AACGCGGTTTCTCGCCAGAGCTTTCAGCAAACAAAGCTTTTATCCCTCAGATTACTTGCTTGCCAAGAATTAGAGGTCGCCGAGCTTTTCATGATTTGCT TATGCATTTCGTGCGTGACCGGTATGGGGAGCTCAACAATCTAGCAGAGCGTGGAGCAGTTTCAAAGTTCACACAAAGAGGGCGTATTCAGTCAGTGCTT CGGCTTCGGTTGTTGCAACGCGGGGTAGTGGCTAGTAATAAATCACACCAGAAATCAACAGCATCTGAAGTGAATAGAAAACCACAAGGATCTGCTATTA TGCAACTAAGGGAAAGATTTAATAGCGGGGTTGGTAATAGAACAACAATGCCAATAGAAGTAGCTGAACCAAGAAGTCCTCATATACAATTTGATGCCTC TAGCACAACTAATGAACTGAGCAAAGACACTTGCAGTCTTATTGTTAATAACACTACCAATCACTCTCCAGAATTCACACAAAAATCAGTGTCTCAAACG AGTGTCGATGGTCATAATAAGGAAGAAGCTCGACCAAGTTCAAACACCAAGCACCAGGAAACATGTCTTGCAGCTCAAGATAATGACTCACAAGAAATAG CCGATTGTTCTCCAGAATCCAAGAAAAAATCAGTTTCTGAAGCTAGTGTAGATCATAATAAGGAAGAAGCTCAACCAAATTCGGACACCACACACCCGGA AACATGTCTTGCAGCTCAAGATAATGACTCACAAGAAATTACTCAGGCAACTCCATCCACGAATGAGTCAAATGTAAAGGATATGGAAGATAAGGTAGAG ACAAGCAACAAACAGTATACTATGGCTGAAACAAGTTACGATGAGACAGAAGAGGACGAGGAGGAGGAGACAAGTCACCAGCACTTTGATGAAAGCTGTT ACGATGAGATAGCAGAAGAGGCTGAGGGTATTGGTCAGAATTATGATGAAACTAGTTATGATTGGATCAGTGAAATTTCTCGGCCTAGGAGCTACTGGGA AGAACGCAGGCAAGAATGGTATAGAGAAATACTTGACACCGAGTCTCACAACGAAGACATAAGAAAGCTCCTTGAAAGAAGAACAGTGTCATCTTTCCTT TCTAGTGACTTCCGCGACACAATGGATAGATTGATGGATTGTCATAGGGGAACACAGACACATTTAGTCAGTAGACAAGATGAAGAGGACAACAACCAAG CGTTGATTGCAATTTTACAAGAACGCTTGCATCTGGCAAGAAGTCCCCGGGAAGATGAACGAGAGCAACCGGAGGACAAAGAAGAGAGGAGAAATGACGA AGACGAAGAAGAACACAAGGAAGAGGAAGAAGAGGAGGAAGAGGAGCATGAGCATGAGAGGGAGACCTTGATCAGTAATTCATATAATGATGCTGGTGAC TATTTTAGTCGATCCTCATCACCAACTAATTTGACAACATGGAGTTATGTAGACAATGAAACCGGTGATGATTTTGATAGAGTTGCATCTATATCCTCAC CGCCTTCTCAATCTCAGTCTTTTGGTAAGGATAGCCGGCAAAATTCTTCATCTGCGAATCATCATTCAATTGAAATGGAACTCATCTATGATTTGAGAGG TCAAATGGAGCAACTTCATCGTGAGATGTCTGAGTTAAGGAAATCAATGAAGACCTCCACAGATATGCAGATGCAAGCACACCAATCCAAGAATCAAGAA GTTAATACAGTTAAAAGGGAAGAAAAGAAGTCACATAACAAGGCTCCAATTAAAGGCAACTGCTGCATTTGCTATGACATGAAAGTGGACTCAGTTTTGT ACAGGTGTGGACACATGTGTGCATGTCTGAAGTGTGCAAATGAGTTACAATGGAACAGTGGAAAATGTCCAATATGTAGAGCTAAAATAGTAGATGTTGT TCGAGTATATGTTGATTTTTAAGCCTCTCTCAGAGGACACAGTACCCTTAATCCTGCAACTTTGTGGGACTGCTAAGATAACACTTTTACATCATTCATC ATACATCATTTTCTCCTTTTTCACATATACTTTGAAGTATATGATTTTTTTAGGAGAGAAGTGTTTGATGACCTTCCTTGTACATTTCATAGTTTTAAAT CTAATCATTCTTTTATTTCTTTATGATGTATTCAGTATTACTCTTGGTCTTTATATTACAAAGAGTTAAAATTGAAAGAAAAAAAATACAGACCCAGATG GCAACATGTGCCTTATCAGAAGTGGAATTTTCTGTTGGAGGTAAAAACAAATCATAAGAGTTGTGCAAATTTATGAGCCAC
• Tissue: pods
• Gene name: LI_gene_181376;
• Additional information: details;

Expression of Ll_transcript_388384

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.5
• PS2: 0.1
• PS3: 0.3
• PW1: 0
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388384

• Blastp: Protein neuralized from Sophophora with 58.49% of identity
• Blastx: Protein neuralized from Sophophora with 58.49% of identity
• Eggnog: protein ubiquitination(ENOG410ZMNG)
• Kegg: Link to kegg annotations (Dmel_CG11988)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424862.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;