Ll_transcript_387029

• Id Trinity: TRINITY_DN50970_c0_g1_i1
• Name Transcript: Ll_transcript_387029
• Sequence: AGAAAATGCATTCACCCAATAAATGTTGCTAAGTACCCAAAAAAAAATAGTATAAAAGAACTCCGAAATTTAGTTGAGTAATTGAGGGATAGTAGCTCAA AATCTCATCTTCCAAACTTGAAAGAGAAGAAGAAAAAGCATAATCATATTTACACACAAAAATCCTTCTCTTGTGTTAATGGATTTCAACACCAGCTTCT GCATTGTTCCATAAACCCTCTTTCCCAAATCTCACTCACGATCCAATTTTCTCTCTCTCTCTCTCTTAAATGCCCCTTTTCTCTTCCTTCAATTTTTTGT TCTGATCTACAATGGCTTCCAACAATAGGATCAATGGGTCCCATTTCCCTGTTCTTGGTTTTCTTCTTCTCTGTCTTTTCCTTCCTCTCATTTTCTTCTT CGTAACTGGCCTTCACACTGTTCCTGATCAAGATGATATTTCAGAGTTTTCAAGTAAACAGGTTTCCAAATGGAAAGAATGGCAGGCATTGGAGGACCTT AAATCACTTTTTTCAAAAGAGGTTCTTGATGTTATTGTGTCCAGCACCGATGATACGGGGCCTCTGAGTCTTGACAATTTCAGAAAAAATAAATTGTCTG CTTCATGGAGACTTGGTGGGTCAAAGACTTCAAATTCTACCATTGAGCTAAACCAACCAGCGACAAATGTTAGACAAGAGAAACAGAAGGGGAAGGAAGG CAGATCTTCAGATGGTCGTGCTCAATTGACTAATAGTCCTGCACAACTTGCCAGAAGGCAATTAATAGAGAAAAGGAAGGAAAAGCGTGCTGCCGAGCTG GTAAAACAGGATGATGATGTGATTGTAAAACTTGAAGATTTGGCTATTGAACGCTCAAAATCAGTTGATTCAGCAGTTCTAGGTAAATACAACATTTGGA GGAAAGAATTTGAGAATGAAAATGCCGATTCTAATGTTCGGTTGATGCGAGACCAAATCATTATGGCTAGGGTATACCTGAGTATTGCAAAGATGAAGAA CAAGCTTCAACTGTACCAAGAATTGCAATCTCAGCTTAAAGAGAGTCAGCGTGCTTTAGGCGAGGCAATATCTGATGCTGAGTTGAATCACAGGTATAAA GCTGTGTGTAATTCTATCTAAAGTGTTAATCTATGATAGGAATAACTCTAGGAATAGGCCTCCTATTAAAAAGGTGCATGTGAGGTGACGAGTTAGAAAG GATTTGAAGGAATAACTAATGGTTTAGATGAATAGATAATTAAATAAAATGGATAATTCCCTAGTTATCAAGATTAGTAATGGATAGTTCCCTAGTTATC AGGATCAGTAGGAATAACCGATAGATTAGAATAAATAAACGATTCCCTTGTTAGGGAGGAATTTCTATCAGCATAAATAAGAGGGGAAGCTCCTCAATTT GGGTGGATTTCAGGTAGTTAGACATTGGCTGGGGAGGTTTATTGGGAATCTGGTTGTAATTATTGGAATTGCTATATTCATTTTAATTAATAATATTCGT CTTCTAGTCTTGATCACATTGATCCTGAATAGAGAATTCACTTTCTTGTCATTGGGTTATTTCTTATTATCTGTCGCTACCAGTTCTATTAATCTATCTG CAATTATATGTCTTTGTCTGCATTTGCTGACTTAACTAGTCAAATATTAAATTATCTCTAGTGCACATGAAAAAATGAAGTCTATGGGCCAAGTTCTGTC AAAATCAAAAGACCAATTGTATGATTGCAAGTTGGTCACTGTGAAGTTGAGGGCAATGCTACAAACTGCTGATGAGCAAGTTAGGAGCTTGAAGAAACAA AGCACATTCCTAAGTCAGTTGGCTGCAAAGACCATACCAAATGGAATTCACTGCTTATCAATGCGCCTTACCATAGATTACTACCTCCTTGCTCCGGAAA AGAGAAAGTTCCCAATGAGTCAGAATTTGGAGAATCCTGGCCTTTATCATTATGCCCTGTTCTCGGACAATGTATTGGCTGCATCTGTTGTTGTCAACTC AACTGTTCTGAATGCAAAGGATCCTTCAAAGCATGTTTTTCACCTTGTTACTGATAAACTAAATTTCGGAGCCATGAACATGTGGTTTTTGTTGAATCCT CCTGGAAAAGCTACAATCCATGTTGAAAATGTTGATGATTTTAAGTGGTTGAACTCATCCTACTGCCCAGTCTTGCGGCAGCTGGAATCTGCAAAAATGA AAGAATATTATTTCAAGGCAGAAAATCCAAAGTCACTTTCAACTGGAGCTTCAAATCTGAAGTACAGAAACCCAAAATATCTCTCAATGCTCAACCATCT GAGATTCTATCTTCCACAAGTTTATCCAAAATTGGATAAAATCCTTTTTCTTGATGATGACATTGTTGTTCAGAAGGATTTGACTGGATTGTGGGATGTG GATCTTAATGGGAAAGTAAATGGTGCAGTTGAAACATGTGGTGCGAGCTTTCACCGATTTGACAAATACCTTAACTTTTCAAATCCACATATTGCAAGAA ATTTTGATCCAAATGCTTGTGGTTGGGCATACGGGATGAACATATTTGATTTGAAGGAGTGGAAAAAAAAGGATATCACTGGCATATATCACAAGTGGCA GAATATGAATGAAGACAGGGTGCTGTGGAAGCTGGGAACATTACCCCCAGGGCTAATAACATTCTATGGGCTGACACATCCGTTAAATAAATTATGGCAT GTACTTGGTTTGGGTTATAATCCAAGTGTTGATCGAACAGAGATCGAGAATGCTGCAGTTGTACACTACAATGGCAATATGAAGCCATGGTTAGAGATTG CCATGACAAAGTATCACTCTTACTGGACCAAATATGTCAAGTATGAAGATCCATATCTTCGGAACTGTAAGCTAAATGAACAGTCCTGATAATTTGGTCC AAGTAAAGATAAAAATTCTCTCTTTTTTCTCCGGTCTCCCCTACCCTCTCTCTTTCCTGGGTTGGCTATTTTAACATCATTGTATTGCTAGAATCATGAT CAAATGTCGTCTTAGAAGGAATAGGGTCAAGCCTGGTGGAATAGGGTTATTGCTTGTTATATATTTCCCCTCAAGATCATCTCTTGCTCACATGATTTTT GCTTTCAATTCATTTTATTTGTTTACCCCACTCTCACCCATTTGAAACAAGTTACATAAGTAGTATGCCATGTTTACTATAAGAACTTCTCATTGTACAA TACTCTGATGCTAAGTCAAGACTAGAAATTGAATATCATATCTCTGTACTTTTTTAAGAAAAAAACTCCCTTATTCAGTTTAGAGAGCCAATTTGTTATT TGCATAAATCTTATCTCTCTCATGAACTTTTCATGAATGATGTTTGTCTGGTTATTTTTTATTCAAGTATTTCTCTTTTACC
• Tissue: pods
• Gene name: LI_gene_181409;
• Additional information: details;

Expression of Ll_transcript_387029

FPKM

• PAB: 0.2
• PNAB: 5.2
• PS1: 2.1
• PS2: 2.1
• PS3: 3.5
• PW1: 3
• PW2: 4.3
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_387029

• Blastp: Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 86.82% of identity
• Blastx: Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 86.98% of identity
• Eggnog: Alpha-1,4-galacturonosyltransferase(ENOG4111FC1)
• Kegg: Link to kegg annotations (AT3G61130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461900.1)
• Pfam: Glycosyl transferase family 8 (PF01501.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;