Ll_transcript_387043

• Id Trinity: TRINITY_DN50970_c0_g1_i12
• Name Transcript: Ll_transcript_387043
• Sequence: TCAGAGTTTTCAAGTAAACAGGTAGCATTTTTATGCATTTTCAGGTTTATTGGTTATGTAAATAAACGTGTAAAGCTTCTTGCTGTTTCTATTTGTTTTC CTTTGAATGAAGTTGGTTGTTGCAGGTTTCCAAATGGAAAGAATGGCAGGCATTGGAGGACCTTAAATCACTTTTTTCAAAAGAGGTTCTTGATGTTATT GTGTCCAGCACCGATGATACGGGGCCTCTGAGTCTTGACAATTTCAGAAAAAATAAATTGTCTGCTTCATGGAGACTTGGTGGGTCAAAGACTTCAAATT CTACCATTGAGCTAAACCAACCAGCGACAAATGTTAGACAAGAGAAACAGAAGGGGAAGGAAGGCAGATCTTCAGATGGTCGTGCTCAATTGACTAATAG TCCTGCACAACTTGCCAGAAGGCAATTAATAGAGAAAAGGAAGGAAAAGCGTGCTGCCGAGCTGGTAAAACAGGATGATGATGTGATTGTAAAACTTGAA GATTTGGCTATTGAACGCTCAAAATCAGTTGATTCAGCAGTTCTAGGTAAATACAACATTTGGAGGAAAGAATTTGAGAATGAAAATGCCGATTCTAATG TTCGGTTGATGCGAGACCAAATCATTATGGCTAGGGTATACCTGAGTATTGCAAAGATGAAGAACAAGCTTCAACTGTACCAAGAATTGCAATCTCAGCT TAAAGAGAGTCAGCGTGCTTTAGGCGAGGCAATATCTGATGCTGAGTTGAATCACAGTGCACATGAAAAAATGAAGTCTATGGGCCAAGTTCTGTCAAAA TCAAAAGACCAATTGTATGATTGCAAGTTGGTCACTGTGAAGTTGAGGGCAATGCTACAAACTGCTGATGAGCAAGTTAGGAGCTTGAAGAAACAAAGCA CATTCCTAAGTCAGTTGGCTGCAAAGACCATACCAAATGGAATTCACTGCTTATCAATGCGCCTTACCATAGATTACTACCTCCTTGCTCCGGAAAAGAG AAAGTTCCCAATGAGTCAGAATTTGGAGAATCCTGGCCTTTATCATTATGCCCTGTTCTCGGACAATGTATTGGCTGCATCTGTTGTTGTCAACTCAACT GTTCTGAATGCAAAGGATCCTTCAAAGCATGTTTTTCACCTTGTTACTGATAAACTAAATTTCGGAGCCATGAACATGTGGTTTTTGTTGAATCCTCCTG GAAAAGCTACAATCCATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCTTCGTACTGCCCTGTCCTGAAGCAGCTTGAATCTGCCGCAATGAAAGA GTATTATTTCAAGGCAGGACATTCAACCACAGGCGCTTCTAATCTGAAGTACAGAAACCCAAAATATCTCTCAATGCTCAACCACCTCAGATTCTATCTT CCTCAAGTTTATCCAAAATTGGATAAGATTCTTTTTCTCGATGATGACATTGTTGTCCAGAAGGATTTGACTGGATTATGGGCTGTGAATCTGCATGGAA AAGTAAATGGTGCCGTTGAAACATGTGGCGAGAGCTTTCACCGATTTGACAAGTACCTTAACTTTTCAAATCCGCATATTGCAAAAAATTTCGATCCAAA TGCTTGTGGTTGGGCATATGGGATGAACATGTTTGATTTGAAGGAGTGGAAAAAGAAGGATATTACTGGCATATATCACAAGTGGCAGAGTATGAATGAA GACAGGGTGCTGTGGAAACTGGGAACATTACCTCCTGGGCTAATGACATTCTATGGATTAACACATCCTCTAAATAAATCATGGCATGTACTTGGTTTGG GTTACAATCCAACCGTAGACCGTTCCGAGATCGATAATGCTGCCGTCATACACTACAATGGTAATATGAAGCCATGGTTAGAGATAGCCATGACAAAGTA TAGGCCTTACTGGACCAAATATGTCAAGTATAATCATCCCTATGTTCAGAACTGTAAGCTAATTGAGTGATCCTGAGAATTAGATCTTAAGAACAAAGAA CACTTTTTTTGGTCCTCCACAATACCCTACCCTCCTTCCTTTATACCTTGCTTGAATGGTCAATTGTCCTAGAATGATAGGATTGATGTTTGTTTTGTAT TTACCCCTTCATCTCTTTACCACGCCATTGATTTTTATTTTTAATTGATTTAATTTGTTTAAGTCACAGTACCTAATTTTAAGCAAGGTGCATAAGTAGT CTACCTTGTTTACTAAAACAACTCTTATTGTACACTATGATGCTAAGAATGAACTTAGAATTGAATAACATTTTCTTGTATTCTTTCAAAAATAGCTTTC ATGAATTATTTGTTTTAGAGGGTGAGTCTCAGGAGCTCCATTAAAGTTGCTTGTCTTGTGATCTGGAAGTTATTGTTAAATATGATAATACTGTTTATTT ACCCTATCCAGGTCCTGTGGGAGTCTTGTACACCAACTCGCCATATGTATTTTTTATCTTTGCGTATACTGATGTTTTAATTCTCGAATCCTGGATGTTT GTTTGGTCATTTTTTTTGTCATGGTGACGAATTTGATTAATGGGTTATCACCTTTCTTGAAGTTGTCAGAATTTGTAAGAACAAATCGGAG
• Tissue: pods
• Gene name: LI_gene_181409;
• Additional information: details;

Expression of Ll_transcript_387043

FPKM

• PAB: 3.4
• PNAB: 21
• PS1: 12.1
• PS2: 10.9
• PS3: 10.1
• PW1: 12.9
• PW2: 14.8
• PW3: 11

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_387043

• Blastp: Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 85.21% of identity
• Blastx: Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 77.32% of identity
• Eggnog: Alpha-1,4-galacturonosyltransferase(ENOG4111FC1)
• Kegg: Link to kegg annotations (AT3G61130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461204.1)
• Pfam: Glycosyl transferase family 8 (PF01501.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;