Ll_transcript_387036

• Id Trinity: TRINITY_DN50970_c0_g1_i7
• Name Transcript: Ll_transcript_387036
• Sequence: AAAATAATTGCCTCGCTGCATGCTAATAAAGTAGAGAAGGAAAGCGATAGAAAAAAGAAAAAGAAAAAAAGAAAAAAAAAATGAAGAGAGAAAAAGTTTC TTCCTTTTTCTAACTACTTTCCTTCTTCACCAGTCATCACTTTCGCACACGAATTTGACGAATAGATTTTGCGACGATTTTCTCTCTCACATTGTTATTT TGTGACGGTTACAAATTTCGAAACACACACACACACACTCTCTTTGCTTCAATCTTTTTGTTTTTGATGGGTTACACTCACATTGTGACGTAATTCCTCA AAAGCTAACACTTCATTCTCTCTCTAAATGCTGTTTTCTCGCTCTAGAAGTTACTCGAATTTCCTCTATTGTTCTGAAGGTTTCTTCTGAGATTCGAATG GCGCTGAAGCGAGGGATTTCGTTTGAGAAGAATAGAAGCAAGGGATTTCATTTCTCCGTTCTGCTTTTCGTTCTCCTATTTGTTCTTGCGTCTGTGGTTT TCTTCTTCGGCCCCAGGCTCTATGCTACTGCGGATCAAGGTGATATTTCAGCTGTCCCAAAAAAACAGGTTGCCAATTGGAGAGAATGGCAATCACTTTT TTCACAAGAGGTTCTTGATGTTATTGTATCTATCACGAATGATATGGGGCCTTTAAGTCTTGACAATTTCAGAAAAAATAATTTGTCTGCCTCATGGAGA GTTGCTGGATCAGAACCCTCAAATGCTACATATGAGGTTTGGAAGACTAATTTGATTCTGCATGGAACTTTCGGTTCCTGTATTTAAAAAAAAATTATTC GTTCTAAATTTTAATACATGTTTAAATCTTTTTCGTTAAAGCTAAGCCAACCAACAATGCATGCTAGACAAGAAAAACCAAAGGCAAAGGAGGACAAATC ATCAGATGGCCGTGCTCAGTGGAGTGATAGTCCTACACAGCAAGCCCGAAGGCAATTAATAGAGAAAAGGCGAGGAAAACGCGCTGCTGAGTTTGTAAAA CTGGATGATGAAGTGACAGTTAAACTTGAAAATACAGCTATTGAACGCTCACAATCAGTGGAGTCAGCCGTTCTGGGTAAATACAACATTTGGAGACAAG AAATGGAGAATGAAAATGCTGATTCTATGGTTAGGTTGATGCGGGACCAGATCATTATGGCTAGGGTATATTTGAGTGTTGCAAAGATGAAGAACAAGCT TGAACTGTACCAAGCACTGCAATCTCGGTTGAAAGAGAGTCAACATGTTTTAGGTGATGCAAATTCTGATGCAGGTCTACAGCACAGTGCACATGAAAAA ATGAAGGCTATGGGCCAAGTTCTGTCAAAAGCAAGAGAGCAATTATATGACTGCAAGTTGGTCACTGGAAAACTGAGGGCAATGCTACAAACAGCTGATG AGCAGGTTAGGAGCATGAAGAAACAGAGCATATTCCTCAGTCAGTTGGCTGCCAAGACGATACCAAATGGAATTCATTGCCTATCAATGCGCCTTACCAT AGATTACAACCTCCTTCCTCTTGAAAAGAGAGAGTTCCATATGAGTGAGAACTTGGAGAATTCCAGTCTGTATCATTACGCATTGTTTTCAGACAATGTG TTGGCTGCATCTGTGGTTGTCAACTCAACTATTATGAATGCAAAGGTGACCCTGATTGTCTTTTTACCATAACAGTGATTTTGAATATGTCCTTCCCATG CGTTATCAATTATCTCCCGTACAGATGGCAGATAAATCTGTAGCATGCCCATGTTTTGCATGTACAGTACTACCTCTGGTTTGATAAATTATGTAATATT GTCAGCGTTCATTGTCTTTTTATGCTCTTGTGTTGAAACATTGCAGGACCCTTCCATGCATGTTTTTCATTTAGTTACTGATAAACTAAATTTTGGAGCC ATGAACATGTGGTTTCTGTTGAACCCTCCTGGGAAAGCTACAATCCATGTTGAAAATGTTGATGATTTTAAGTGGTTGAACTCATCCTACTGCCCAGTCT TGCGGCAGCTGGAATCTGCAAAAATGAAAGAATATTATTTCAAGGCAGAAAATCCAAAGTCACTTTCAACTGGAGCTTCAAATCTGAAGTACAGAAACCC AAAATATCTCTCAATGCTCAACCATCTGAGATTCTATCTTCCACAAGTTTATCCAAAATTGGATAAAATCCTTTTTCTTGATGATGACATTGTTGTTCAG AAGGATTTGACTGGATTGTGGGATGTGGATCTTAATGGGAAAGTAAATGGTGCAGTTGAAACATGTGGTGCGAGCTTTCACCGATTTGACAAATACCTTA ACTTTTCAAATCCACATATTGCAAGAAATTTTGATCCAAATGCTTGTGGTTGGGCATACGGGATGAACATATTTGATTTGAAGGAGTGGAAAAAAAAGGA TATCACTGGCATATATCACAAGTGGCAGAATATGAATGAAGACAGGGTGCTGTGGAAGCTGGGAACATTACCCCCAGGGCTAATAACATTCTATGGGCTG ACACATCCGTTAAATAAATTATGGCATGTACTTGGTTTGGGTTATAATCCAAGTGTTGATCGAACAGAGATCGAGAATGCTGCAGTTGTACACTACAATG GCAATATGAAGCCATGGTTAGAGATTGCCATGACAAAGTATCACTCTTACTGGACCAAATATGTCAAGTATGAAGATCCATATCTTCGGAACTGTAAGCT AAATGAACAGTCCTGATAATTTGGTCCAAGTAAAGATAAAAATTCTCTCTTTTTTCTCCGGTCTCCCCTACCCTCTCTCTTTCCTGGGTTGGCTATTTTA ACATCATTGTATTGCTAGAATCATGATCAAATGTCGTCTTAGAAGGAATAGGGTCAAGCCTGGTGGAATAGGGTTATTGCTTGTTATATATTTCCCCTCA AGATCATCTCTTGCTCACATGATTTTTGCTTTCAATTCATTTTATTTGTTTACCCCACTCTCACCCATTTGAAACAAGTTACATAAGTAGTATGCCATGT TTACTATAAGAACTTCTCATTGTACAATACTCTGATGCTAAGTCAAGACTAGAAATTGAATATCATATCTCTGTACTTTTTTAAGAAAAAAACTCCCTTA TTCAGTTTAGAGAGCCAATTTGTTATTTGCATAAATCTTATCTCTCTCATGAACTTTTCATGAATGATGTTTGTCTGGTTATTTTTTATTCAAGTATTTC TCTTTTACC
• Tissue: pods
• Gene name: LI_gene_181409;
• Additional information: details;

Expression of Ll_transcript_387036

FPKM

• PAB: 2.3
• PNAB: 0.5
• PS1: 1.6
• PS2: 0.6
• PS3: 0.5
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_387036

• Blastp: Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 73.09% of identity
• Blastx: Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 54.79% of identity
• Eggnog: Alpha-1,4-galacturonosyltransferase(ENOG4111FC1)
• Kegg: Link to kegg annotations (AT3G61130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_015947556.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;