| Id Trinity | TRINITY_DN50970_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_387038 |
| Sequence | AGAAAATGCATTCACCCAATAAATGTTGCTAAGTACCCAAAAAAAAATAGTATAAAAGAACTCCGAAATTTAGTTGAGTAATTGAGGGATAGTAGCTCAA AATCTCATCTTCCAAACTTGAAAGAGAAGAAGAAAAAGCATAATCATATTTACACACAAAAATCCTTCTCTTGTGTTAATGGATTTCAACACCAGCTTCT GCATTGTTCCATAAACCCTCTTTCCCAAATCTCACTCACGATCCAATTTTCTCTCTCTCTCTCTCTTAAATGCCCCTTTTCTCTTCCTTCAATTTTTTGT TCTGATCTACAATGGCTTCCAACAATAGGATCAATGGGTCCCATTTCCCTGTTCTTGGTTTTCTTCTTCTCTGTCTTTTCCTTCCTCTCATTTTCTTCTT CGTAACTGGCCTTCACACTGTTCCTGATCAAGATGATATTTCAGAGTTTTCAAGTAAACAGGTTTCCAAATGGAAAGAATGGCAGGCATTGGAGGACCTT AAATCACTTTTTTCAAAAGAGGTTCTTGATGTTATTGTGTCCAGCACCGATGATACGGGGCCTCTGAGTCTTGACAATTTCAGAAAAAATAAATTGTCTG CTTCATGGAGACTTGGTGGGTCAAAGACTTCAAATTCTACCATTGAGCTAAACCAACCAGCGACAAATGTTAGACAAGAGAAACAGAAGGGGAAGGAAGG CAGATCTTCAGGTGGTATCATACTATCAGGTAATATGCTTATGTTGTATTTTAATTTACTTTCTCATTCAATTTCTTTTATTTAATGCAGATGGTCGTGC TCAATTGACTAATAGTCCTGCACAACTTGCCAGAAGGCAATTAATAGAGAAAAGGAAGGAAAAGCGTGCTGCCGAGCTGGTAAAACAGGATGATGATGTG ATTGTAAAACTTGAAGATTTGGCTATTGAACGCTCAAAATCAGTTGATTCAGCAGTTCTAGGTAAATACAACATTTGGAGGAAAGAATTTGAGAATGAAA ATGCCGATTCTAATGTTCGGTTGATGCGAGACCAAATCATTATGGCTAGGGTATACCTGAGTATTGCAAAGATGAAGAACAAGCTTCAACTGTACCAAGA ATTGCAATCTCAGCTTAAAGAGAGTCAGCGTGCTTTAGGCGAGGCAATATCTGATGCTGAGTTGAATCACAGGTATAAAGCTGTGTGTAATTCTATCTAA AGTGTTAATCTATGATAGGAATAACTCTAGGAATAGGCCTCCTATTAAAAAGGTGCATGTGAGGTGACGAGTTAGAAAGGATTTGAAGGAATAACTAATG GTTTAGATGAATAGATAATTAAATAAAATGGATAATTCCCTAGTTATCAAGATTAGTAATGGATAGTTCCCTAGTTATCAGGATCAGTAGGAATAACCGA TAGATTAGAATAAATAAACGATTCCCTTGTTAGGGAGGAATTTCTATCAGCATAAATAAGAGGGGAAGCTCCTCAATTTGGGTGGATTTCAGGTAGTTAG ACATTGGCTGGGGAGGTTTATTGGGAATCTGGTTGTAATTATTGGAATTGCTATATTCATTTTAATTAATAATATTCGTCTTCTAGTCTTGATCACATTG ATCCTGAATAGAGAATTCACTTTCTTGTCATTGGGTTATTTCTTATTATCTGTCGCTACCAGTTCTATTAATCTATCTGCAATTATATGTCTTTGTCTGC ATTTGCTGACTTAACTAGTCAAATATTAAATTATCTCTAGTGCACATGAAAAAATGAAGTCTATGGGCCAAGTTCTGTCAAAATCAAAAGACCAATTGTA TGATTGCAAGTTGGTCACTGTGAAGTTGAGGGCAATGCTACAAACTGCTGATGAGCAAGTTAGGAGCTTGAAGAAACAAAGCACATTCCTAAGTCAGTTG GCTGCAAAGACCATACCAAATGGAATTCACTGCTTATCAATGCGCCTTACCATAGATTACTACCTCCTTGCTCCGGAAAAGAGAAAGTTCCCAATGAGTC AGAATTTGGAGAATCCTGGCCTTTATCATTATGCCCTGTTCTCGGACAATGTATTGGCTGCATCTGTTGTTGTCAACTCAACTGTTCTGAATGCAAAGGA TCCTTCAAAGCATGTTTTTCACCTTGTTACTGATAAACTAAATTTCGGAGCCATGAACATGTGGTTTTTGTTGAATCCTCCTGGAAAAGCTACAATCCAT GTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCTTCGTACTGCCCTGTCCTGAAGCAGCTTGAATCTGCCGCAATGAAAGAGTATTATTTCAAGGCAG GACATTCAACCACAGGCGCTTCTAATCTGAAGTACAGAAACCCAAAATATCTCTCAATGCTCAACCACCTCAGATTCTATCTTCCTCAAGTTTATCCAAA ATTGGATAAGATTCTTTTTCTCGATGATGACATTGTTGTCCAGAAGGATTTGACTGGATTATGGGCTGTGAATCTGCATGGAAAAGTAAATGGTGCCGTT GAAACATGTGGCGAGAGCTTTCACCGATTTGACAAGTACCTTAACTTTTCAAATCCGCATATTGCAAAAAATTTCGATCCAAATGCTTGTGGTTGGGCAT ATGGGATGAACATGTTTGATTTGAAGGAGTGGAAAAAGAAGGATATTACTGGCATATATCACAAGTGGCAGAGTATGAATGAAGACAGGGTGCTGTGGAA ACTGGGAACATTACCTCCTGGGCTAATGACATTCTATGGATTAACACATCCTCTAAATAAATCATGGCATGTACTTGGTTTGGGTTACAATCCAACCGTA GACCGTTCCGAGATCGATAATGCTGCCGTCATACACTACAATGGTAATATGAAGCCATGGTTAGAGATAGCCATGACAAAGTATAGGCCTTACTGGACCA AATATGTCAAGTATAATCATCCCTATGTTCAGAACTGTAAGCTAATTGAGTGATCCTGAGAATTAGATCTTAAGAACAAAGAACACTTTTTTTGGTCCTC CACAATACCCTACCCTCCTTCCTTTATACCTTGCTTGAATGGTCAATTGTCCTAGAATGATAGGATTGATGTTTGTTTTGTATTTACCCCTTCATCTCTT TACCACGCCATTGATTTTTATTTTTAATTGATTTAATTTGTTTAAGTCACAGTACCTAATTTTAAGCAAGGTGCATAAGTAGTCTACCTTGTTTACTAAA ACAACTCTTATTGTACACTATGATGCTAAGAATGAACTTAGAATTGAATAACATTTTCTTGTATTCTTTCAAAAATAGCTTTCATGAATTATTTGTTTTA GAGGGTGAGTCTCAGGAGCTCCATTAAAGTTGCTTGTCTTGTGATCTGGAAGTTATTGTTAAATATGATAATACTGTTTATTTACCCTATCCAGGTCCTG TGGGAGTCTTGTACACCAACTCGCCATATGTATTTTTTATCTTTGCGTATACTGATGTTTTAATTCTCGAATCCTGGATGTTTGTTTGGTCATTTTTTTT GTCATGGTGACGAATTTGATTAATGGGTTATCACCTTTCTTGAAGTTGTCAGAATTTGTAAGAACAAATCGGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_181409; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_387038
| Blastp | Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 86.97% of identity |
|---|---|
| Blastx | Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 87.13% of identity |
| Eggnog | Alpha-1,4-galacturonosyltransferase(ENOG4111FC1) |
| Kegg | Link to kegg annotations (AT3G61130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461204.1) |
| Pfam | Glycosyl transferase family 8 (PF01501.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |