Ll_transcript_388671

• Id Trinity: TRINITY_DN50972_c0_g1_i2
• Name Transcript: Ll_transcript_388671
• Sequence: AAAGGATCCAGCGTCTATAAGAACCACAAAATGTGGTCTAAAAACACATCATTTCAAATTCATAATATTAAACCTAATCTTCTCAAATTAAGAAAATAAT GAATCAACTTACCAAATTCATCACATTCTTTCCAATATTTTATTATTTAATTAATTAATAGCATCTCCATTTTGGTCCCACCATACCAAAATAAATATTG AATTTTTCTGTTTCCTCAAAGTTCCACCCAATCAATCATTCATTAAGGAGGGATCTTTCTTTTTTCTATCACACCCTCTTCTCTTTCTCTCTCCCTCTCT ATCCTCAAAGCCTCTGTTCTGTGAAGGAGGAACTATTGCTTTGGTTTGACACTTAGATTGCACCTTTTTCTCTGAGCAGTGAATTTGAGAAGGGTTCATT CCGACTCAGTGACAGAACAAAACAGAGAATCGGGTGCTTTTGTGCTGATGGCAACTAATGAGAATCTTCCACCAAATGTAATAAAGCAACTTGCCAAGGA GTTGAAAAATCTTGATGAATCCCCTCCCGAGGGCATTAAAGTTGTGGTAAATGATGATGATTTTTCTACAATATTTGCTGACATCGATGGTCCAGCTGGG ACTCCTTACGAGAATGGAGTTTTCCGCATGAAGTTATTACTGTCTCGTGATTTTCCGCATTCTCCACCTAAAGGTTTTTTCCTCACTAAGATTTTCCATC CAAATATTGCAACCAATGGAGAGATTTGTGTAAACACACTTAAAAAGGATTGGAATCCCAGCCTTGGGTTACGGCATGTTCTTATTGTTGTTAGGTGTCT ATTGATTGAACCATTTCCAGAATCAGCTCTAAATGAGCAGGCTGGGAAACTGTTGCTTGAAGACTATGACGAGTATGCTAGACATGCCAGGCTTTACACT GGAATCCATGCAAAACCAAAGCCGAAATTTAAAAGTGGAGCTATATCGGAATCAACCACTGCTCTGAATGTTGATCAGACAAACACCTCAGTGCTTAGTG CTGATATTAAAACTGCACCACAAGGTGCTGCATTGCCATTGCAGTCCTCATTGGCCCCCTCAACCACAGCAACAAGAGGAAACGGCCAGGAACATGCCGC GGTTATTCCGGCCGAGACAATTGTTAATGCTTCTGCTACAGTTCTTTCTGCTGCTCCTGTACCACAAAAGAAGGAAGGTGGGCAAGCCAAAGCTCAGCCA GACAAGAAGAAGATAGATGCTAGAAAGAAAAGTTTGAAAAGATTGTGATGAAGTTGTTCAAGAATTGAACTTTTCATTTGTGGCTTAGTTTTGCTAGAGA AAATGGGGGGGAGAGGGTGTCTCTCATAGGAAGATGGATTTAACATGTGCTTTTTAATAAGAATCTTCCATTATGAGTAAATGGATGAAATTCAACTATT GTCTATTTGTCCTTGTGTAATTCTATTGGGCCTTGTGTTATTCTGAGTATGATGGTGGACTATTTTTCTTTCTAATTATCTTAAC
• Tissue: pods
• Gene name: LI_gene_181421;
• Additional information: details;

Expression of Ll_transcript_388671

FPKM

• PAB: 36.3
• PNAB: 11.9
• PS1: 14.7
• PS2: 14.8
• PS3: 15.9
• PW1: 22.1
• PW2: 21.2
• PW3: 34.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388671

• Blastp: Ubiquitin-conjugating enzyme E2 22 from Arabidopsis with 71.16% of identity
• Blastx: Ubiquitin-conjugating enzyme E2 22 from Arabidopsis with 70.27% of identity
• Eggnog: ubiquitin-conjugating enzyme(COG5078)
• Kegg: Link to kegg annotations (AT5G05080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429458.1)
• Pfam: Ubiquitin-conjugating enzyme (PF00179.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;