Id Trinity | TRINITY_DN50978_c0_g1_i6 |
---|---|
Name Transcript | Ll_transcript_387300 |
Sequence | TAATCGAGTGAAAATGCAGAGACCAAAATATTACTATAACCTTTTCTTCTGCTTGAAATGATTGCTTTAGAAGTTTGAAGTGGAAGATCACAAATTTTGG GTCATAGTTTGTTTGTATGATTGTTATAGTTAGTTTCACAATGTTTGTTGTTTTGTTTGAAATCTGGAATTTTGAAGTTTCTAACTGTTCTGTTTTATGT TGGTATTAGAAGACTTCAAGAACATTAGTTATGCAACTCGTGCAAGACATTTGTTAGAGGATAATGAGTCCCAGGCTCAGAAAATGTAATCATAATGGAT ATTCTTCTGTTTATGTTGATTTTGCTCGAGGGTACATGACCAATGATGACCTTGAAACAGCCGTCAAGGAATTTGGACAAAGGTGCAGCAACATATCTAG GATATACAGGTTGTTCCTCATACATGTGCTTGTTTCTTGATTATCTATCTCAATATTCTACCTTACCGAAGGATATTATAACCCAAGATACATATTAATA TCATATTTAATGAATAAATGAACTTCTTGGAAAGGTTGTACTTATTGCAATTGCTAAACTGACTTTGAGATTTTTCTCTCTTTGAGGGATTCATGGAATG TGCAATTAGTATTGGGAAGAGTGTGAATGGAGTACCACTGTGGGTGATAGAGATTTCTGACAAGCCGGGAGAAGAAGAGGCTGAACCTGCATTTAAGTAT ATTGGAAACGTGCATGGAGATGAACCTGTGGGACGTGAGCTTCTTATATTTCTGGCCAATTGGCTATGTGATAACCATTTGAAAGATCCTCTGGCAACAT TGATTGTGGAGAATGTTCACCTTCATATCCTTCCATCAATGAATCCTGATGGGTTTAGTTTAAGAAGGCGCCGTAATGCAAATAATATTGATCTGAACCG GAATTTTCCGGACCAGTTCTTCCCTGTAAATGATGATGAGGATTCTCGGCAACCTGAAACAAGAGCAATAATGAATTGGTTGAGAGATATACGATTTACA GCATCTGCCACTTTGCATGGGGTATTACTTATTTCGAATTCACGTAATAGTTCCTTTAATCTGTAATTCTTTTATGTCTACTCTGCGCTGAGCTGTCTGT TTCCTGTTTTTTGTGATCTGTTACAGAATGTCTTCCACGAGTGTTTGCATAACTTATGTTCATTTCTTCACTGGCATCCTACCTTTTGTTTCCCCCTTCT TTTTATTAAGTGTTCGAAAAGGCCAACCAATGTGAACTAAGCCTGAATAGTTTATCTTGTTGAATTGGTGTGACGTTTGCTACGGTTTTTTTGAATTCAT CTATGATTATATGATTTATATGCAGAAGTTTGTTCATTAATGGTCTCTTTTCTGTTTTGCCACAGGGTGCACTTGTTGCAAATTATCCTTGGGATGGTAC TGAAGATAAAAAGACAAATTACTACGGATCTCCTGATGATGATACGTTTCGATTCATGGCAAGTATATATAGTCATTCTCACTATAACATGTCTTCAAGC AAGGAGTTTCCCGGTGGAATTACTAATGGAGCAGCTTGGTATCCTATATATGGGGGAATGCAAGATTGGAACTATATACATGCTGGCTGTTTCGAGCTGA CCTTGGAAGTTAGTGACGATAAATGGCCTAATGCTGCTGAGGTTAGTTCTGATCGAGCCTGAGCACTATTTAAAATTACAAGTATATAGGCAAAATAATC GGTACAACTTACTAGAGAACATTTTTTGAATCCCTGTCTGGGTATCCCTATGCTCTTTAGGTATGAGATAATGCCGTTCGTGTTATTAAGGTTTCCTATT CCCAGCAATGTGTTCCCACACTCAAACCTCTGACATTAAACACTGTTCAACTCCTTAACTCAAGCCTTCTTATCACCTGAGATGCAACCTTTTGGCATTG ATACAAGAGAACACAAAAAGGCATCACTTTGAGCTTATAAATCAGAATGACGTGTGTTAGGAAAATGTTTAAAAATGTTTTTGCCAATTGCATCTGTCAT ATAGACCAAAGGGGCAAAGAATAACAAATCCATTAAGCCATGGTCAAGTAAATGATAGTTGGAGAAGGAGGAGTTTTGGTGATAAAATCTTAGAAGACGG GATAATAGATCCCAGCCTGAATCCACAAAGAAACATGAGGTGCATCCTGAGATTATTCAAGCATTCTATTTAAAGAGCTCCCATTATAAAATAAATAGGA CTAGATAATGTTTTTGTGTGTGACATTTTCACATAGATCCATCTTAAGCAAGGCGGATTTGCATTGACCGATAATGTTTCCAATCAACTTGTACTATTTT TACGAAGATAGTAGATCCTGTCCATTCTATCACTAAGGGAATTCTCCTGTTTCAATGATCATGGATTTTCTCTATTTCCAGTTAGATAGCAATTATAATT TGGACTAAAGTTGCTCATATTCTAACCAGAAATCATCCTGCTTAACACCATCATAGCTGAGTTCATTTAATTTTGTTTCTTTTTATTGCATTGCCTTATG TTTGATGATCTTGACCAACAGAGGCATGAAATTTGATATTTGGTTTGCATGAATGGCATCTACATATTGTTGGTTATGCTTTGCTTTTCACTGTGATTCT TAGGACACTACTTGTTCTGTATGTTAATGTGCAGCTTCCTGTCATTTGGAGATATAACAAAATGAGCTTGCTTAACCTTGTTGCAAGCCTTGTGAAGACA GGAGTGCATGGTAGAATATATTCTTCGGGTGATGGAAGGCCATTGCCGGGCTTTATAACTGTCAGTGGAATAAATTACACGGTTAGAGCAGGAACTGTTT TTGCTGACTACCATCGCATACTTGCCCCAGGAGATAAATACCGAGGTATTATCGTATATTCATACATATTTCCGATTATTTTGTAATTGTAGTAGTACAC GAGTGGAAGCCTTCCCCGAAGATCTTACGAAATAATTAAATATTTAAAAATGAGTGTCTCAAGTTTGACATCTAAGTGGGTTCTTAAGTTCTGTGAGGCA TGAATTGCAATTGATTGGCAAAAATAAAATAAATGTTAAACCAAAAGACAAATTCAATATTGCATCCAAAAGTTCAGGACATTTAGGTTTCCTATCGAAA CTCGAAAATGTAGGGCTCAAAATTAAACACATAATTACTCATCTTACATAGGTTTGACAATTTTCCTGGATAGGATATAAATCTCAGTTCCATTCCTAGG TGAATATTCTACTTCTTAGATCGTGTAACGAAATTCTGTATCTAAATTGCAGTAGTGGCGACCATGCCGGGCT BLAST |
Tissue | pods |
Gene name | LI_gene_181454; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_387300
Blastp | Carboxypeptidase SOL1 from Arabidopsis with 81.25% of identity |
---|---|
Blastx | Carboxypeptidase SOL1 from Arabidopsis with 83.33% of identity |
Eggnog | carboxy-peptidase(ENOG410XX0H) |
Kegg | Link to kegg annotations (AT1G71696) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442044.1) |
Pfam | Zinc carboxypeptidase (PF00246.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |