Ll_transcript_388479

Id TrinityTRINITY_DN50983_c3_g1_i27
Name TranscriptLl_transcript_388479
SequenceAAGAGGAATGACAACTCAGATACTTATGAATAAGGTTGAAGAAACAATGCAAATTATTATTAATAAGAATAGTATTATAAAGGAGAGGATATGCAGTAAT AATAGTGTGGGATGGAGTGATGAGTGGGAAATAAGAACAAACAGTTGGTAGGCACTAGGCAGGAAGGAAATACTAGAGAGAGCAAATAGCCTTGAGCCTG TTGGCGGCAGATTGATCTATGGAATACTGCAGGAATCAAAATTGAAGAATGGATTAGATATTATTTAGATAGAGAATGGATGAATTAGACATTATGAATG AATAGGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAGAATGATAATACCTTGTTGAGAACCCAGAGTGAATGATGGTAGGTGCGT TGGAAGAGTTCATGAAGAGTAGAAGAATCAACATGACGGTAGTTGACGAAGTTTTCACGAACATACTTCGCATAATAACCTCTTGTTTCCTTTGGTAAAT GCCTCACCAGACGGAGTACCTCTGCATAAGCTCTCACCGCCTTCGACATTTCTACAAAACCCTACAACTAACATCCAATTCATCATTTTCTACAATTTCT ATTGGGCTTTTTGGGCCCTAACCTTTATTCATTTCATTTCAATTTCAAAAATTCCAAAATATCTTAACAAATATTTCATTGTTTTGTTTTGTTTGAAGAA GCAAGTCGAAGAAATGAGTTTAGATTCCTCTCGCTCACCAAATCCTTCTTCTAAAAGAACTTTCTCTGATTTTAATCCTGCTTCTTCCTCATTTAATAAT AATAATAATAAGAAGAGGAAGAAGACGATAAAGGCGAAAACCCTAGACGTCGTTTGGGGCTCTAATTCCCATATTGGCAGTTATATGGCAGACAAGAATC GTAAACTGCAGAACCAATTTCACACTGAAGCTGCTGCTGCTGCTGCTGCTTCCACATCCTCTATCTTCTCTGGAGTTTCCATTTTTGTTGATGGTTTCAC CGTTCCTTCCACCCAGGAGCTGCGAAATTACATGTTAAAGTATGGTGGCAGATTTGAAAACTATTTCTCAAGACATCATGTAACTCATATCATCTGCACT AATCTTCCTCACACTAAACTTAAGAACCTCAGAGCCTTCAGCGCAGGCCTGCCTGTCGTCAAACCCACTTGGATTTTAGACTCAGTTGCAGCTAATAGAC TCTTGAGCTGGGTGCCTTACCAACTTGACCAGCTTGTTAATAACCAGCCAAAACTGTCGTCCTTCTTCACATTGAAAAGTCACAAAATGTCAGAGGATGC TTGTACAAATGCGCTTTCTCAAGCAGTACCAGATGTTGAAGATTTGTCTCTCAGGGTTGGGCAATCAAAGGATACATACTCATCTGAAGTTGGGGAGGTG GTTGAACTTAGCAGGCAACTCAGGTTCAGTTCTGAATCTGATGATATTCTCACAGAGAATAATAATGCAATTACAATGGAAGAGCCTACCACTGTTAGAG TTAGATGTGATGAAGAAGGGATAGCAGAAGGAAGCAATGCTGACACTGGAGATGAGAGAAACGTCCAAGGTGAACTTGACCTTAATCATCAAGAATATTG TATGTCAGTTACTACTCCCTGCTCAGAATCCTCACCTGACCAGAATGTAAAAGAATTGCCAAGTTCTGAAATCTCTAGGCCTTCTAAGCATTTTCATTCA ACTCTGGCAGACCCTAATTTTGTGGAAAATTATTTCAAGAGCTCAAGGCTGCATTTCATTGGGACTTGGAGAAATCGTTATCGAAAGCATTTTCCGGTCT CATCTACTTCGTTTAACAATGAAAATTCTAATATTCACGCCTCTCAGAATCCACTCATCGTCCATGTTGACATGGACTGCTTTTTTGTCTCGGTGGTTAT CAGGAACCACCCTGTATTGTTGGACAAGCCAGTAGCAGTCTGTCACTCAAATAATTCGAAGGGAACTTCTGAGATTTCCTCTGCAAACTACCCTGCTCGT GGTTATGGTATTAGGGCTGGTATGTTTGTTCGAGATGCCAAGGCACTTTGTCCCCACCTTGTTATCTTTCCTTACAACTTTGAAGCTTATGAGGAAGTAG CTGATCAATTTTATAGTATACTACATCGACATTGCAGCAAAGTGCAGGTCTTATGGTCCACAACCTATAAGTGTATAAAGTTTTTAGGTTGTTTGTCCTT AATGCTATAACCACCACTTCATGCAGGCTGTAAGCTGTGATGAAGCTTTTTTAGATGTCACAGATTCAAAGGTTGAAGATCCTAAACTTTTTGCTGCAGC AATTAGAAAAGAGATCTATGAGACCACTGGATGTACGGCTAGTGCTGGTATAGCTGGAAATATGCTTATGGCTCGCATTGCCACTAGAACTGCAAAACCA AATGGTCAATATCACATAACTCCAGAAAAAGTTGAATACGAGTTAAGTCAACTCTCAATTAATGCACTTCCTGGAATAGGGCATGTTTTACAGCAGAAAT TGAAGAAACAGAAAGTTCACACTTGTGGGCAATTGCAAATGATTTCCAAGGTTGTACTATCTCCTCACTTATTATATAGTTTCTTTGATTTGTTCTGCTA TTCTTAAAGTTCAGTTGCTATTTCTTCTAAAATTTGTACTTTCTGCTTTCAGTCTATTATCAGTGTTCTTGTTTTGGTCTCAACTAAAGAGAATACACAC TTAGAGGAAAATATTTGATTTGTTGAAATTTTGGAAACAACTTAGAAGTTAGAAGACAATAATCATTGAAAATGAGAAGCTCATTGACGCAATAAAATAT AATGCTAGAATATACGGAAAAAACCTTGAAGTGCTTCAAACAATTATATTGCTACTGGGTTGATTTAGAGATCAATGCTTTGTCAATGGACATGATTCAT GATAGAGCTTAATGACGTCGTTCGGTCCATTTAACCGACCCAACCTATTGGGACTAAAGTTTGGTTGTTGTAAAAGCTCATTTACTTGCATACTCTGTAG TTATGTCTCACTTTTATTTTGGGCATCTAGTTGAATAACATTTGTAATTTTCAAGATTCTGTAATTGCTTTCCTGGCGTCTGCAGGCTTCCCTGCAAAAG GATTATGGAGTTAAAACGGGGGAAATGCTGTGGAATTATAGCAGAGGAATTGATAACAGGATGGTTGGGGCCATTCAGGAAAGTAAGTCTATTGGTGCTG ATGTAAATTGGGGAGTTAGGTTCAAAGATATGAAAGATGTTGGTATTTTTATACACTGTATCTTTTATTTTAACTTTCAAATTTCAATCTTACAAAATAC TGTATCATTGAAAATGCTCATATAAAAGTTATTCCAGTGTGATCACTTCCTAATTAACCTCAGTAAGGAAGTTTCTTTGCGATTGCAAGGTTGCGGAGTG CAGGGGCGCACTTTCATTATCAAGATCAAAAAGAGAAGAAAAGATGCTGATGAACCTGCAAAGTTTATGGGCTGTGGTGACTGTGAAAATTTGAGTCACT CAATAACGATTCCTCTTGCTACTGATAATGTGGAAGTAATCCAAAGAATAGTAAAGCAGCTTTTTGGATTTTTCTACATAGATGTCAAGGATATTCGGGG TGTTGGCTTGCAGGTTTCAAGACTTGAAAGTGTAAATACTTCTAAGCAAGGTGCAGAAAAGTGTACTTTGAAATCATGGCTTACTTCAGGATCTGCAAGT ATGGGAAAACAGAAATATCCTATGGGTAACAAGCAGAATATAGATGGCATGTCCAGTCATGGATGTAGAGATTTGCAAGGGTCTTCAGTTCTAATAGACA ATAACATAGTAAATAACCAAGCTAGTGCAGACACAATGTTAACAGCACCTCCTTTATGCCAACTAGATGTCGAAGTAATAAAGAATCTACCGCCAGAAGT ATTCTCAGAATTAAATGAAATGTATGGAGGAAAGTTAGTTGATTTTGTTGCTAAAGGGAAAGGAACAAATGAGAGTGCTAGATCTGTACGAAATTTGATT ATAGAGCAAGAAGCTATAAAGAAGGATGCAGAACTTTCCTATTCTGACCGAATTCCTCAAAACAAGTTGTTACCAGAAAACAAGAAAGAAGCAGAGGTAG TTGAAGTAGGACCAGGCTCAAGGGATGGATCCTATGTCAAGGTTACTCACATTTCAAGTTTTGAGAAAGATGATTTATTGCCTTCTTCTTTAAGTCAAGT GGATGCTTCAGTGTTACGACAATTACCCGAGGATTTGAAAGCCGCCATTGTTGAGCAGCTTCCTACACACAGGAGGCAAGAGTCTTGCTCCAATGCTGCT GTGCCCCCTCTTAGTGAAATCGGTCAGGCACCATTAGGTATTAAAAGTTCTGAGAATCATTCTGGATCAAGTGGTCACGTTTCGAGTGAAAGTCTATGGG CTGGGAATCCTCCACATTGGATTGATAAGTTTAAAGTTAGCAATTGCTTCATATTAAAGAGGCTTGCAGAAATATATTACAAATCAGGGTTGACTAGCAC ATTATCTTCAGTTTTGCACAAAATTATATATGAATTTCACGAGCTAGATCTAGCGCATCAGATTTCTGATGAAGCTATTAACATCACGTGTGAGCTACTG AAGCAGTATACCGAAGAGAAGATAGAAAGAGATATTGAAGAGATTTATATCTGTTTTCGGCTTCTGAAAAGGT BLAST
Tissuepods
Gene nameLI_gene_181475; 
Additional informationdetails; 

Expression of Ll_transcript_388479

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_388479
BlastpDNA repair protein REV1 from Arabidopsis with 53.02% of identity
BlastxDNA repair protein REV1 from Arabidopsis with 53.19% of identity
EggnogPoorly processive error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by polIV. Exhibits no 3-5 exonuclease (proofreading) activity. May be involved in translesional synthesis in conjunction with the beta clamp from polIII (By similarity)(COG0389)
KeggLink to kegg annotations (AT5G44750)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421546.1)
PfamBRCA1 C Terminus (BRCT) domain (PF00533.25)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;