Ll_transcript_386887

• Id Trinity: TRINITY_DN50984_c2_g2_i7
• Name Transcript: Ll_transcript_386887
• Sequence: ATTAGAGATATAGAGAAGTTGTCTCTTTCTTCCTTTCTGTGAGAGAAGTGAAAGAAAGCAGAACAAAACAAAATCAGATTCTTCCAAGTACAAACCTTAC CTTTTGATCGAGTAAAGTTGAAGAAAATACATTATTTCAGAGTACTATCTAATATCTGAACTCACTTCTTCATCTCAATGAGAGGAACGTGAATCTCACT GTTTCTACAAAAGGGTTGGTTAAAGTTCTTCTCTTTCCTTGGTGGGGTTTTCAGATTCAAACCAGTGGAAGCAAGTAACCCAGCCTTTTTTCTACAATTT CACTCTCTTTATTCAACGACCAAAAAAGTTTCAAAGTGAAAGATTTCAATGAAGGAAGGTGTTATTGAGAAGAGTTTGGATCCGCAGCTATGGCACGCGT GTGCAGGGAGTATGATTCAGATGCCTCAGTTGAACTCCAAAGTTTTCTACTTTCCACAAGGTCATGCTGAACACGCTCAAACAACCCTTGATCTCACACC CTCTTTGAGGATTCCACCACTCATTCTATGCACACTTGCCTCAGTCAAATTCATGGCAGACACTGAAACTGATGAAGTCTTCGCCAAGATGTGGTTGGTT CCTCTTAGAAATTCCAACCTTGATGGCCTCAATGATGTTGATGTGGTTGAAAATTCAGAAAAGCCTGCATCTTTTGCCAAAACTTTAACTCAATCTGATG CTAATAATGGTGGTGGATTTTCTGTTCCAAGGTATTGTGCAGAAACTATTTTTCCTCGCCTTGATTACTCGGCTGAACCGCCGGTTCAAACCGTGGTTGC CAAGGATGTCCATGGTGAGCTTTGGAAGTTTAGGCATATTTATAGAGGCACGCCTCGGCGCCATTTGCTTACAACTGGTTGGAGCACTTTTGTGAACCAG AAGAAACTAGTTGCTGGTGATTCTGTGGTATTTTTGAGGGCTGAAAATGGGGATCTTTGTATTGGAATCCGTAGGGCTAAGAAGGGAATTGGTGGTAGTA CTGGTTCTGAGGTTTCATCTGGGTGGACCTCAGCTTCTGGACATGGAAATTGTGGTGTTGGACCTTATGGTGCATTCTCTTTTTTCTTAAAAGAGGAGAA TAAGTTTTTGAGAAATGGTTGTGGTGGTAATGGTGGTGGTTTGAGTGGAAGAGTGAAGGTGAGGCCTGAAGCTGTTATGGAAGCTATGACATTGGCTTCA AGGAACCAGCCATTTGAGGTTCTTTATTATCCAAGAGCTAGCACTCCTGAGTTTTGCATTAAGGCTTCTGCTGTGAGGGATGCTATGAGAGTTCAATGGG ACTCTGGAATGAGGTTTAAGATGCCCTTCGAAACCGAGGATTCTTCTAGGATAAGCTGGTTCATGGGGACTATAGCTTCTGTTCAAGTTGTCGATCCTAT CAGATGGCCAAATTCCCCATGGCGACTTCTTCAGGTTACTTGGGATGAGCCAGACTTGCTACAAAATGTGAAGCGTGTAAGCCCATGGTTGGTTGAATTG GTATCAAACATGCCAGTCGTCAATCTAACACCCTTTTCTCCACCAAGGAAGAAGCCGAGGTTTCCACAACACCCTGATTTCCCCCTTGACGTTCAATTTC CGATACCAATGTTTTCAGGCAACCAGCATGGGCATAACAACCCCTTGTGTGGTTTATCTGATAACGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCA CTACGGAATATCTCTTTCAGATATCCACAATAACAATAATAAACTGCAGTTGGGGTTGTTTCCAGCAAATATGCAGCAGCTTAATGTGATTTCAAATGCT AACTTGTCCAACCGTGTTAAAAGCAAAGAAAGCTTGTCATGCTTGCTTACCATAGGAAAATCTGATAAGACTTCGGAGAAATCTAACAATGTTGAGACAC ACCAGTTTTTGCTTTTCGGTCAACCAATACTCACTGAGCAACAAATCTCTAGAAACTGTTCTAGGGATGTGTTCTCTCATGATTGTGCCGGAAAAAAATC AGTAGATGAGGTTAAGGATAAGGAAAAGTGTTTTTTTGGTGGCTCCAATTCTGCACTTACACAGCAGTTTCTACCAGGAAAACCTTCTGCCGAGTTTACT TGGCAACTCGGCTTGGATACCGGTCATTGCAAGGTTTTCTTGGAGTCAGAAGATGTAGGACGGACCTTAGACCTATCAAGTCTCGGTTCTTATGAAGAGT TATACAGGAGACTTTCCAACATGTTTGGTATTCAAAGGTCTGAGATGTTGAACCATGTGCTTTACCGGGATGCAACAGGCGCCGTTAAGAATATTGGAGA AGAACCCTTCAGTGAGTTCATGAAGACAGCAAAAAGATTGACAATTCTGATGGATTCAGGCAGCAAAAATATAAGAGGGGCCTGGATTACAGGAACTCGA AATGGTGAACATGGGTTGGATGCATCAAATAAAACTGGTCCACTGAGCATATTTGCATAATATGGTGTACCATATGAATATTATTTACCACTGATAGGAC TAAATGTGAACTAAACCTTTATCAAGGTTGCCATTGTTTTTTTATTTATGCATCATGGTTAACTATTATTGTAATAGCATCTAAGATTTGGACCCATTTG GTGATTTTGTTTTCTCTAGTGTGATGTTATCTATGTGTTTCCACGTCAGAAGTTCCTGAAATTGTCACTAAAGTATGATAATGACTGAGAAGAAATCTTA AAAGTTTATATAGCTAGAGTGTCCAAATATAAAATTATAATGAAG
• Tissue: pods
• Gene name: LI_gene_181489;
• Additional information: details;

Expression of Ll_transcript_386887

FPKM

• PAB: 0
• PNAB: 4.9
• PS1: 6.2
• PS2: 2.7
• PS3: 3.6
• PW1: 1.6
• PW2: 1.3
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_386887

• Blastp: Auxin response factor 18 from Oryza sativa with 58.76% of identity
• Blastx: Auxin response factor 18 from Oryza sativa with 59.19% of identity
• Eggnog: auxin response factor(ENOG410ZZ2C)
• Kegg: Link to kegg annotations (4341882)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453956.1)
• Pfam: B3 DNA binding domain (PF02362.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;