Ll_transcript_386889

• Id Trinity: TRINITY_DN50984_c2_g2_i9
• Name Transcript: Ll_transcript_386889
• Sequence: ATTAGAGATATAGAGAAGTTGTCTCTTTCTTCCTTTCTGTGAGAGAAGTGAAAGAAAGCAGAACAAAACAAAATCAGATTCTTCCAAGTACAAACCTTAC CTTTTGATCGAGTAAAGTTGAAGAAAATACATTATTTCAGAGTACTATCTAATATCTGAACTCACTTCTTCATCTCAATGAGAGGAACGTGAATCTCACT GTTTCTACAAAAGGGTTGGTTAAAGTTCTTCTCTTTCCTTGGTGGGGTTTTCAGATTCAAACCAGTGGAAGCAAGTAACCCAGCCTTTTTTTCTACAATT TCACTCTCTTTATTCAACAACCAAAAAAGTTTCAAAGTGAAAGATTTCAATGAAGGAAGGTGTTATTGAGAAGAGTTTGGATCCGCAGCTATGGCACGCG TGTGCAGGGAGTATGATTCAGATGCCTCAGTTGAACTCCAAAGTTTTCTACTTTCCACAAGGTCATGCTGAACACGCTCAAACAACCCTTGATCTCACAC CCTCTTTGAGGATTCCACCACTCATTCTATGCACACTTGCCTCAGTCAAATTCATGGCAGACACTGAAACTGATGAAGTCTTCGCCAAGATGTGGTTGGT TCCTCTTAGAAATTCCAACCTTGATGGCCTCAATGATGTTGATGTGGTTGAAAATTCAGAAAAGCCTGCATCTTTTGCCAAAACTTTAACTCAATCTGAT GCTAATAATGGTGGTGGATTTTCTGTTCCAAGGTATTGTGCAGAAACTATTTTTCCTCGCCTTGATTACTCGGCTGAACCGCCGGTTCAAACCGTGGTTG CCAAGGATGTCCATGGTGAGCTTTGGAAGTTTAGGCATATTTATAGAGGCACGCCTCGGCGCCATTTGCTTACAACTGGTTGGAGCACTTTTGTGAACCA GAAGAAACTAGTTGCTGGTGATTCTGTGGTATTTTTGAGGGCTGAAAATGGGGATCTTTGTATTGGAATCCGTAGGGCTAAGAAGGGAATTGGTGGTAGT ACTGGTTCTGAGGTTTCATCTGGGTGGACCTCAGCTTCTGGACATGGAAATTGTGGTGTTGGACCTTATGGTGCATTCTCTTTTTTTCTTAAAAGAGGAG AATAAGTTTTTGAGAAATGGTTGTGGTGGTAATGGTGGTGGTTTGAGTGGAAGAGTGAAGGTGAGGCCTGAAGCTGTTATGGAAGCTATGACATTGGCTT CAAGGAACCAGCCATTTGAGGTTCTTTATTATCCAAGAGCTAGCACTCCTGAGTTTTGCATTAAGGCTTCTGCTGTGAGGGATGCTATGAGAGTTCAATG GGACTCTGGAATGAGGTTTAAGATGCCCTTCGAAACCGAGGATTCTTCTAGGATAAGCTGGTTCATGGGGACTATAGCTTCTGTTCAAGTTGTCGATCCT ATCAGATGGCCAAATTCCCCATGGCGACTTCTTCAGGTTACTTGGGATGAGCCAGACTTGCTACAAAATGTGAAGCGTGTAAGCCCATGGTTGGTTGAAT TGGTATCAAACATGCCAGTCGTCAATCTAACACCCTTTTCTCCACCAAGGAAGAAGCCGAGGTTTCCACAACACCCTGATTTCCCCCTTGACGTTCAATT TCCGATACCAATGTTTTCAGGCAACCAGCATGGGCATAACAACCCCTTGTGTGGTTTATCTGATAACGCTCCTGCAGGCATACAGGGAGCCAGGCATGCT CACTACGGAATATCTCTTTCAGATATCCACAATAACAATAATAAACTGCAGTTGGGGTTGTTTCCAGCAAATATGCAGCAGCTTAATGTGATTTCAAATG CTAACTTGTCCAACCGTGTTAAAAGCAAAGAAAGCTTGTCATGCTTGCTTACCATAGGAAAATCTGATAAGACTTCGGAGAAATCTAACAATGTTGAGAC ACACCAGTTTTTGCTTTTCGGTCAACCAATACTCACTGAGCAACAAATCTCTAGAAACTGTTCTAGGGATGTGTTCTCTCATGATTGTGCTGGAAAAAAA TCAGTAGATGAGGTTAAGGATAAGGAAAAGTGTTTTTTTGGTGGCTCCAATTCTGCACTTACACAGCAGTTTCTACCAGGAAAACCTTCTGCCGAGTTTA CTTGGCAACTCGGCTTGGATACCGGTCATTGCAAGGTTTTCTTGGAGTCAGAAGATGTAGGACGGACCTTAGACCTATCAAGTCTCGGTTCTTATGAAGA GTTATACAGGAGACTTTCCAACATGTTTGGTATTCAAAGGTCTGAGATGTTGAACCATGTGCTTTACCGGGATGCAACAGGCGCCGTTAAGAATATTGGA GAAGAACCCTTCAG
• Tissue: pods
• Gene name: LI_gene_181489;
• Additional information: details;

Expression of Ll_transcript_386889

FPKM

• PAB: 0.2
• PNAB: 1
• PS1: 1
• PS2: 0.6
• PS3: 1.1
• PW1: 0.1
• PW2: 0.6
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_386889

• Blastp: Auxin response factor 18 from Oryza sativa with 55.02% of identity
• Blastx: Auxin response factor 18 from Oryza sativa with 57.29% of identity
• Eggnog: auxin response factor(ENOG410ZZ2C)
• Kegg: Link to kegg annotations (4341882)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453956.1)
• Pfam: Auxin response factor (PF06507.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;