Ll_transcript_388076

• Id Trinity: TRINITY_DN50988_c0_g1_i5
• Name Transcript: Ll_transcript_388076
• Sequence: CAAACTGTTCATATTGAGAAGCTTAGTGACACACAGTGCCAGCCTGAGTCACAGCTTAAGTTCATAACCGAGGCCTGGCTACAAGTAAATCAATTTCTCT CCCTTTTTTATGGCTTTCTTCAGTTTGCTTCGTAATGAATCATGAAGCCTTAACATGTTCATTGTAAGAGTAGACCAGTTATTCCCCTGGGGGACATTTG CTACTAGTTTTATTGTTATAGCTGCAGGGAGTTTTCATTGTTTTAGTTGTGGGGAATTTTTTGTTTAAGCAGTCACAATTGCGTGAAGTCATTTCAGGAT GACATAGAAGGCTTCCAAATCAATGTTTTCATGCTTGCAGATAGTCGAGTGTAGGCGAGTGCTGAAATGGACATATGCATATGGTTACTACTTACCAGAG AATGAGCATGCGAAAAAGCAGTTCTTTGAGTACTTACAAGGTGAAGCAGAATCTGGTCTGGAGAGACTTCATCAATGTGCCGAAAAGGAACTACATCCAT TCATCAACGATGGTGGCCCATCTAGAGAATTTAATGACTTTCGTACAAAGCTAGCTGGATTGACTAGTGTAACTAAGAACTACTTTGAGAACTTAGTTAG AGCATTAGAGAATGGCCTATCTGATGTGGATGCTGATGGAGCTACCTCCAGCAAAGCAACAAGCTCAAAAAATGCTGCAGGGAGCAGCAAGGGGAGAGGT GGAAGAGGAAAGGGAACTTTACGAAGCAGCTTGTCCAATAGGATGTCCGATGATAGTCATTGGTTTTGCGAGCAATGTACCTATGCAAATGTCAAATCTG CCACCGCATGTCAGATTTGCAATCATCAGCGTCGATGAACTTTTGGGCTCACTGTTGGAAACAAATGCCTCCAGTCCAAGGCCACTGCACCAAAAGCAAG TGGAGTTAACTGCTACTTGTGGGTAGTTAAATACTTAAATGATAGTTCCATTTTGTGAGGCTACTGAAAATGTGATCAGGATGAAGTGGGTAGGGCATGG AAGAAAAGTTGCCCTCCTTGCACTCTAGTTTTATACCACCTAATTTGATGTATATAGTGTTCCATCTTAATATTTATATATGGGGTTTCTGCAACAGGCT TTTATAACTGAATACCATAGCAGTAGATTCTGCAGATGAACACAAATATGTTTGTTTTTGTCCTGATTTCTTTCAGTAAATCTCTTGGCAGTTTCCTCAA GTTAAAGCCAGTGTTTGGTTCATTTTTAGAAATCAAGGGACTGAAATAACTATTGTACCATATCATTTGAGATTTTATTGTACATTTGTCAAGTTTGTGG CTGGTTTTGATAATTTGGTAGGTTCCTATTTGGTGTGTAATGTGTGCCTCCGAGTTGGTGTATGACTTAAGGTTGTAGCGCTGGTGCTGCTGCTTATTTT TTACTTTTCTACATGAGTTGTCTTCCTAGGTCCACTTGGGTGAATTGTGGTTGGCTACCAAATTATTGAGAACCTTGGCTCAAGGTCAACTTGTACTACT ATACTACTGAATACTGATCATTCATATTTTAGCAACACTCTACGGATAAGTATTTCGTGTGTGATCTTTTTTTTTACTATACACAAGGTACATTGTCTCA ATTTCTGCAAACGTGA
• Tissue: pods
• Gene name: LI_gene_181527;
• Additional information: details;

Expression of Ll_transcript_388076

FPKM

• PAB: 3.8
• PNAB: 2.6
• PS1: 1.5
• PS2: 1.6
• PS3: 2.8
• PW1: 1.8
• PW2: 2.3
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388076

• Blastp: Probable E3 ubiquitin-protein ligase ARI8 from Arabidopsis with 64.46% of identity
• Blastx: Probable E3 ubiquitin-protein ligase ARI8 from Arabidopsis with 63.25% of identity
• Eggnog: RING finger) protein(ENOG410XP9Y)
• Kegg: Link to kegg annotations (AT1G65430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448565.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;