Ll_transcript_388080

• Id Trinity: TRINITY_DN50988_c0_g1_i8
• Name Transcript: Ll_transcript_388080
• Sequence: CACTATTATGCGCGGTGGGCCAGCAATCAACCTTCACGACAAAAGGCTCTTGCAGATCTACATCAGATGCAAACTGTTCATATTGAGAAGCTGAGCGATA CACAGTGCCAGCCTGAGTCACAGCTTAAGTTCATAACCGAGGCCTGGTTACAAATAGTCGAGTGTAGGAGAGTGCTGAAATGGACATATGCATATGGTTA CTATTTACCGGACGACGAGCATGCGAAAAAACAGTTCTTTGAGTACTTACAAGGTGAAGCAGAATCTGGTCTGGAGAGACTTCATCAATGTGCTGAAAAG GAACTACATCCATTCATCAATGCTGATGCCCCATCTAAAGAATTTAATGACTTTCGTACAAAGCTAGCTGGATTGACCAGTGTGACTAAGAACTTCTTTG AGAACTTAGTTAGAGCATTAGAGAATGGTCTAACTGATGTGAATGCTAATGAAGATGCCTCCACCAAAGCAACAAGCTCAAAAAATGCTGCAGGGAGCAG CAAGGGGAGAGGTGGAAGAGGAAAGGGAACTCTGCGAAGCAGCATATCTGATGATAATCATTGGTTTTGCGAGCAATGTACCTATGCAAATGTCAAATCT GCCACCGCATGTCAGATTTGTAATCATCAGCGTCAATGAACTTTCGAGCTATCCATTGGGAAAAGTTGCCTCCAGCCAAAGGCCACTGCACCCAAAGCAA GTGGAGTTACTGTTTACCAAAAAAATGCAAGTGGGTTTGCTGCTCTTTATGCCTGGTTATATGACAGTTCCATTTTATGAGGCTATTAAACATGTGAACA TGATGAAATGGGTAGGGCATGGAAGAAAAGTTACCCTCCTTGCACTCTTGTTTTATACCACCCAATTTGATGTATATAGTGTTCTATCTTAGTATTTATT ATATATGGAGTTTCTTCAACAGGCCTTTGTAGAACTGAGTATAACAGTAGATTCTGCAGATAAACACAAATATGCTTGTGTCCTGTTTTCTTTCCGTAAA TCTCCTGGCAGTTTGTATAAGATATAAAGCCAGGGTTTAGTTACTTTTTAAGAAATCAAGGGACTAAAATAAATATTGTACCATATCACTGGATATTTTA TAGCACATTTGTCAACTTTTGTGGCTCCATTGATAATTTGGTGCTGTTATGTGTGCCTCTCTTATGAC
• Tissue: pods
• Gene name: LI_gene_181527;
• Additional information: details;

Expression of Ll_transcript_388080

FPKM

• PAB: 27.8
• PNAB: 19.7
• PS1: 31.3
• PS2: 26
• PS3: 37.1
• PW1: 22.2
• PW2: 24.6
• PW3: 22.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388080

• Blastp: Probable E3 ubiquitin-protein ligase ARI8 from Arabidopsis with 69.67% of identity
• Blastx: Probable E3 ubiquitin-protein ligase ARI8 from Arabidopsis with 66.82% of identity
• Eggnog: RING finger) protein(ENOG410XP9Y)
• Kegg: Link to kegg annotations (AT1G65430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413205.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;