Id Trinity | TRINITY_DN50989_c1_g1_i1 |
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Name Transcript | Ll_transcript_387182 |
Sequence | GGAAAATTAAGGCATCTCTTCCTCTTAGGTCCCTCCAATACTATAAATAGAAACGAGACTCATCATTTTCTATACTACTTACCATCCAAATTGGGTTTCT CTCACACACTAATATTCAACAACGACGGTTACTTACGAGAGGAATACAAACTTCCCTATTTCCTTTCTTCATTCCAACGTTTCTCATCATGTCTGACACA GTTGTTTTATCCAACAATAAACGCAGTCATTCTGATGACATTGAAGGCGGTGATGCAAAGAAAACTTTGTTATCCAACAATTCCGCCTCGATGCTCCCTA CTGACCCTGCCGCCGCATTAGCCAGCGTGCGACACGAGTTTGGGGAGCATGGAGGTGTGAACATGTCAATTGAGACATCCGCCACGTTTACCGTGATGGA ACCGGAAACCATGGGGCGGATGTTCTCTGGAGAGTTGGGTCCTGACCGTGACTTCTTTATATATAGTCGTCACTTCAACCCGACGGTGTTGAACCTCAGC CGCCTCTTGGCCGCCATGGAGGGCACGGAGGCCGCCTATTGCACTGCCAGCGGTATGGCCGCCATCTCGGCTGTAATGCTACAGCTCGTAGGGTGTGGCG GACACGTGGTGGCTTCTCGTACCCTGTACGGTGGGACCCACGCGCTGCTGAGTCACTTTTTGCCAAGGGTTAGTAATATAACGACGACGTTTGTTGATGT GACGGATCTGGAGATGGTGAAGGAGGCTATGGTGGAAGGGAAGACAAAGGTGTTGTACTTTGAGACTATTTCGAACCCTACCTTGGCGGTGGCGAATATA CCGGAGCTGAGCAAGTTGGGCCATCAGAAAGGGGTGACGGTGGTGGCGGATAACACTTTTGCTCCGATGGTGATTTCTCCGGCGAGGCTTGGAGCTGATG TGGTGGTTCATAGTATCTCTAAGTTTATCAGCGGTGGAGCAGACATCATTGCAGGTTTGTCTTCCTTTGCTATTTTATATCTTATTTAATTTTTGTTTTA TAAACCTTTTCAAAAATAGATGTATGAGTACTATATTATTTAGTTTTAATTATCCC BLAST |
Tissue | pods |
Gene name | LI_gene_181531; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_387182
Blastp | Methionine gamma-lyase from Arabidopsis with 72.27% of identity |
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Blastx | Methionine gamma-lyase from Arabidopsis with 71.92% of identity |
Eggnog | cystathionine(COG0626) |
Kegg | Link to kegg annotations (AT1G64660) |
CantataDB | Link to cantataDB annotations (CNT0002470) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428651.1) |
Pfam | Cys/Met metabolism PLP-dependent enzyme (PF01053.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |