Ll_transcript_387193

• Id Trinity: TRINITY_DN50989_c1_g1_i3
• Name Transcript: Ll_transcript_387193
• Sequence: GGAAAATTAAGGCATCTCTTCCTCTTAGGTCCCTCCAATACTATAAATAGAAACGAGACTCATCATTTTCTATACTACTTACCATCCAAATTGGGTTTCT CTCACACACTAATATTCAACAACGACGGTTACTTACGAGAGGAATACAAACTTCCCTATTTCCTTTCTTCATTCCAACGTTTCTCATCATGTCTGACACA GTTGTTTTATCCAACAATAAACGCAGTCATTCTGATGACATTGAAGGCGGTGATGCAAAGAAAACTTTGTTATCCAACAATTCCGCCTCGATGCTCCCTA CTGACCCTGCCGCCGCATTAGCCAGCGTGCGACACGAGTTTGGGGAGCATGGAGGTGTGAACATGTCAATTGAGACATCCGCCACGTTTACCGTGATGGA ACCGGAAACCATGGGGCGGATGTTCTCTGGAGAGTTGGGTCCTGACCGTGACTTCTTTATATATAGTCGTCACTTCAACCCGACGGTGTTGAACCTCAGC CGCCTCTTGGCCGCCATGGAGGGCACGGAGGCCGCCTATTGCACTGCCAGCGGTATGGCCGCCATCTCGGCTGTAATGCTACAGCTCGTAGGGTGTGGCG GACACGTGGTGGCTTCTCGTACCCTGTACGGTGGGACCCACGCGCTGCTGAGTCACTTTTTGCCAAGGGTTAGTAATATAACGACGACGTTTGTTGATGT GACGGATCTGGAGATGGTGAAGGAGGCTATGGTGGAAGGGAAGACAAAGGTGTTGTACTTTGAGACTATTTCGAACCCTACCTTGGCGGTGGCGAATATA CCGGAGCTGAGCAAGTTGGGCCATCAGAAAGGGGTGACGGTGGTGGCGGATAACACTTTTGCTCCGATGGTGATTTCTCCGGCGAGGCTTGGAGCTGATG TGGTGGTTCATAGTATCTCTAAGTTTATCAGCGGTGGAGCAGACATCATTGCAGGTGCTGTGTGCGGGCCTGCAAGTTTGGTGAATTCAATGATGGATCT TCATCAAGGTGCTCTAATGCTGTTGGGCCCAACCATGAACCCCAAGATAGCATTTGAACTCTCTGAAAGAATCCCTCACTTGGCCTTAAGAATGAAGGAA CATTGCCACCGTGCATTGGTGTTTGCAAAGAGGCTGAAAAACCTAGGACTCAAGGTTATTTACCCTGGGCTTGAAGACCATCCACAACATGAGTTATTGA TGTCCATGGCCAACAAGGATTATGGGTATGGTGGGATTCTTTGTGTTGACATGGAAACTGAGGAGAGGGCCAATTGGTTGATGAACCACTTGCAAAACTA TGGACAATTTGGTTTGATGGCTGTTAGTTTGGGTTACTATGAAACACTTATGTCTTGCTCAGGTAGTAGCACAAGCAGTGAGATGAACTCAGAGGAAAAG GAACTTGCTGGAATTTCACCAGGTCTTATAAGGATGTCTATAGGGTATATAGGGACATTGGAGCAGAAGTGGACTCAGCTGGAAAAGGCACTTACAAAAC TTAAGGAACATGACCTATCTCACAAGAATTGAGTCATCTTTATTTGTAGTATTTGTGATGTTTGTATTCATGCAGTTGTATTCAGAAATGATGTTTCATG TTTGTGTTTGAGAGTCATGTAAGTGTACTTGATCTGTACATAGTGCACTGGATCATTTCTTAAGGTTCAATAAAACTTGAGACGGTTTCTTTTGCATTAT TATAGCTAATAAATAGTCAATTTTTTTTGCACCAACGAATAAATACTTAAATAG
• Tissue: pods
• Gene name: LI_gene_181531;
• Additional information: details;

Expression of Ll_transcript_387193

FPKM

• PAB: 63.1
• PNAB: 86.6
• PS1: 52.5
• PS2: 12.8
• PS3: 20.4
• PW1: 131.1
• PW2: 170.3
• PW3: 72.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_387193

• Blastp: Methionine gamma-lyase from Arabidopsis with 72.31% of identity
• Blastx: Methionine gamma-lyase from Arabidopsis with 71.95% of identity
• Eggnog: cystathionine(COG0626)
• Kegg: Link to kegg annotations (AT1G64660)
• CantataDB: Link to cantataDB annotations (CNT0002470)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428651.1)
• Pfam: Cys/Met metabolism PLP-dependent enzyme (PF01053.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;