Id Trinity | TRINITY_DN50992_c1_g1_i12 |
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Name Transcript | Ll_transcript_388833 |
Sequence | TCACAATCAATTATGATCAAATCAAAGCAATTAAACATGTAGATTTGTCCCTTACTCACCCCTCCTATTCATATCTATATTAGATAGTGAAAATGAAATG ACCCACTACCAATATTACACTTTCTTTTAAAACATTGAACTCAACAACACACAAAATTTGTGAATGAGAGATTCATACATAGGTGTCCATTTCTATCACT CTGTTACTACTGTTAGTGGTTAAAACATCCTCAAATATCTTTATATCATGCATTGGAATGCTTGTTCAATTCCATATCCAATTTCTCAACAATCTCTCTA ACTATTACAGTGACAGTTTCTGTATGAACTTCTGAGGTGTTATCATGGAGTGGAATTCAAAATCACTAGGGCAATGGGACTGGGAGGAGAACTTATTCTT TTTCAATGGAAAAGCTTCAGAAAATACTAAGTTACAATCAACCACAAATTGGAGTTCTGAAGCAGATCAAGAAATCAATGTTGGGCTGTTCTATCCGTCA AGGGGTAGTCGTTGCTCCGAGTCTGAACTAATGCATGCTTCTTCGTCAAGGAGCTCAAAATCAGCTTCCATCAATTCATCAACAAATGAGGATACCAAAT TATCTATGTTCACTTTGGAAGCTTCTCAAGATGATGATTCAACCGGTAAGAAAGAATTGTCCAAAGAAGAGCCAGTTGAAACTTCTCCAGCACCAGAACC CTCTTCTGCCTCTGGTGAACCATTGCTCACTCTGAAGCTTGGTAAAAGGTTGTACTTTGAGGATGTTTGTGCAGGAAGTGATTCCAAGAGACCGTCTTCA AGTACTGGAAAGAAATGTAAATCCAATGGTCAGAACTTGCAGCATCCAAGCTGCCAGGTTGAGGGCTGTGGCCTTGATCTCTCATCTGCGAAGGACTACC ATCGCAAACATAGAGTTTGTGAAAATCATTCCAAATTCCCTAAGGTTATTATAGCTGGCTCGGAACGTCGAT BLAST |
Tissue | pods |
Gene name | LI_gene_181568; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388833
Blastp | Squamosa promoter-binding-like protein 3 from Oryza sativa with 42.27% of identity |
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Blastx | Squamosa promoter-binding-like protein 3 from Oryza sativa with 39.45% of identity |
Eggnog | Squamosa promoter-binding-like protein(ENOG410YKP9) |
Kegg | Link to kegg annotations (9270639) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438295.1) |
Pfam | SBP domain (PF03110.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |