| Id Trinity | TRINITY_DN50994_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_389033 |
| Sequence | ATACAAAGTACATAGTTATGTACTCACTACAAAACCCACGTCCCATCCATTTCTATAAACAACAACAAACACCTGAAACGATGACCCATCTAACCGCCAC CGATAACAACCACCACCACCATCCCCCGCCGCCGCCACTAATCCTCACCGAGAGCAGCGGCGACGACCCAGAACTCGACCAATTGAAAGCCCCGAAGAAA CGCGCGGAGACATGGGTTGAAGACGAGACTCGAAACCTAATCGCATTGAGGCGTGAGATGGACGCGCTTTTCAACACTTCCAAATCGAACAAGCACCTGT GGGACCAGATTTCTGCGAAGATGAGGGACAATGGTTTCGATCGGTCTCCGACTATGTGCACTGATAAGTGGAGGAATTTGCTTAAGGAGTTCAAGAAAGC GAAGCACCAAGATAATTGTGGCAATGCTAAGATGAGTTTTTATAAAGAGATTGATCACATTTTGAGAGAGAGGGTTAAGAATTTGCAGTATAACACTCCT AAAGTTGACACCTTTATGCACTTTCTGCAAAAGGGTACTTTTTTTCATACATTCATTTATCAAATTTACTTTAAGTGTCAAACAAGCAAAAAATAACATT TACTTTTATCTAGAGAGTTATAAGCAAATTAGATTACGATCCCAACAAGACGTTGGTCTAGTACTGTAAGACTCTGGTTTTTAGGAAGACTAAAAGGTTA AAAGTTTAATTCTTAGGAGCGACACTTATTGGAAGGGCAGTCACAAACCCAAAAAGTGAGAGCATACCCTTGATAGTACAAAAGAATTAGATTACGATAA CCAACAATCTAGTTGTGTAAGACCCTGATTCTCAGAAAGACTAAAAGGTTAAGATTTTAATTCCGGGCTCATAGGACCGGCTAGCATAGATAGACATGTT TAGCTTAGTTGGGTAGATTGTAGGTTTTAATCAAGGGCTCATTTTGATGAGTTTTTGTGAAATAAGCTAAAAATAACTTATGAATCTGTATCTAAGTTGG GTAGATAGTAGGAACACTTGAAATCTGACACAGATGTGTGGACAATTTGTGAAAAAGAAAAAAAAAAGATATCTCTCAAGTTACATTTCTTTCCTTTCGT GTTTCGAAATGCTTGTTTGACTGGTTATGTTTCTGTGCAGGTGTTGAGGATACTAGCATCTCTTTTCTGCCTGTTGAAGGTACCGGAAGACCAACACTCA ATCTTGAGAGAGGTTTGGATCATGATGGGCATCCTCTTGCCATTACCACAGCCGATGCCGTTGCAGCAAGTGGAGTCCCCCCTTGGAATTGGAGAGAAAC TCCTGAGAATGGTGGGGAAAGTCGGTCATGTTGTGGTAGGGTTATATCTGTGAAATGGGGCGATTATACAAGGCGAATTGGTATCGATGGTACGGCAGGA GCCATCAAGGAGGCAATTAGGGCTGCTTTTAGATTGAGAACTCGACGCGCATTTTGGTTGGAGGATGAAGAGCAAATCATCAGAAGTATTGACCGTGACA TGCCCTTAGGAAATTACACTCTTCACCTTGATGAAGGAATGGCTGTTAAAGTATGCCTGTATGACGAGTCTGACCATATCTCTGTGCATACTGAAGAGAA GATCTTCTACACCGAAGATGATTACCGTGATTTTCTAACGCGCCGAGGTTGGACATGTCTAAGGGAGTTTGATGGGTATAGAAATATTGACAACATGGAT GATCTTCGACCCGGTGCCGTATATCGCGGTGTGAGCTGAGAGGGCAGGTTCATGGTATATGATGCATCATGTAGAATTTTGGAGGAGACTGTTTATGTTA GGAACATATGTGTAATGTTGAAGTTTTTAAAATGCTGCTTATGTAGTATCCTATTTGTTCTTTTCCAGAACACAAGGGTATAATACACAATAGAACAGTA ACAGAAAGGTAAAAGTTGGAGGAGGTGATTTGAGATGGAGGAGAGAGAGAGAGGAAGAGGAAGAACGTTGAACAGCAAGTTGAAGATGAGAGGAACTGGA CCCGCCGGTGGAGGAACCTGAAAAGGTTCTCCGACGATCAAGTCAGTATATGAGCTTGAGTAAGATAGGGAGTAGAGGAATAAGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_181592; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_389033
| Blastp | Trihelix transcription factor GT-1 from Arabidopsis with 66.44% of identity |
|---|---|
| Blastx | Trihelix transcription factor GT-4 from Arabidopsis with 72.73% of identity |
| Eggnog | DNA binding protein GT-1(ENOG410XUBM) |
| Kegg | Link to kegg annotations (AT1G13450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417472.1) |
| Pfam | Myb/SANT-like DNA-binding domain (PF13837.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |