Ll_transcript_389050

• Id Trinity: TRINITY_DN50994_c1_g1_i12
• Name Transcript: Ll_transcript_389050
• Sequence: GTATGTTCTATCCTCGGACAGGGTTGTTTCCGGTACAAAAAAATACAAACTAAAAAAAAAAAATTGAAGGTATATAAATACAAAAGTCACCTCTTTGTGT TCCTAAAAAAAAATGTACTCATTAGAAAAGCCACGTCCCATTGATTTCTACAAAGAAGAAGAAGAAAGCCCAGACATGATGATCGAAGTGGTCCCCACCA CCGACAACAACAACCACCACCACCTCCAACAACCACCGCCACCACCACCGCTAATCCTGACCGAGAGCAGCGGCGAGGACCCAGAACTGGACCAAATGAA AGCCCCCAAAAAACGCGCGGAGACATGGGTCCAAGACGAGACGCGTAACCTAATATCCCTTCGTCGTGAAATGGACGCGCTTTTCAACACTTCGAAATCG AACAAACACCTTTGGGAGCAGATTTCGGCGAAGATGAGGGACAAGGGTTTCGATCGTTCTCCAACTATGTGCACTGATAAATGGAGGAACTTGCTTAAGG AGTTCAAGAAAGCAAAGCACCAAGATAATAGAGGGAGTAGTAAGATGAGTTATTATAAAGAGATTGATGAGATTCTGAGAGAGAGGAGTTGTAAAACTCT GCATTATAAGACACCCACTCCTCCAACTCTTTCTAAAGTTGATTCCTTTATGCATTTTGCTGACAAAGGTATTGAGGATGCTAGCATATCTTTTGGGCCT GTTGAAGGTATGTGTCATTGTAACATATTGCAATTGTTAGGTTATTATGTTTTAGTACTTTTTATTATGTTCACTTGTTTCCTTTATTATAACATTTGGT TTACTACTAGATAGTTTTATTGGTAGATTTAGCTAATTGAAGTTATTTGAGACATGTATGTGGAACAGTGAAGTATTTATAAGGAATGAACATGCTGATG TACTCATATGCATTCCCTTAAAATTTAACCATTATGATGGACATGCTTTTAGCGTTCTGGTATGCTCTTTTTTTTTGTGGTAATTGTTTTCATTTAATGA TGGGAATAGTGGGATAAATGATGAAATGTTGTTACTTTGAAGGGCTTGTTGAAATGAGAGTTCAAAATATGCATCTGTAGAATGGGTAGTTCTGGGTATC ATACTATCATATATTTACACGGAACTCGTTAACAAGGTAGTCAAATGTTTGCTGTCCCCACCGCAGGCCTCACTTTCACCGTAGCTGCCAATTCTTGTCT TGGTCACTCTCCTTAAGTACCTAGGTTTGTTTGGGTTCATGGGTGAGATTGAAGAGGGTTAAGTTTTGGGTTTTCAGGTGTTTTCGGTCTGGAAACTAGG TTCGGTCTAATTTGGGCTTAACCCCTGTTCCACGAAACAAGCCAAGCTCGAAAAAAGCAGAAACAAGAGTGAGCATCTAGCTGTTTATCACTTTTCATTT GTCAAATTTCTCACTTCTAATAATTTATAGGAAATCATTAGGTTCATGTGTGACCAGGTAAATTTGTTCATAGAATGAAACCATTGATTAGAGGGTTTTA AGTGGTAAGGAGGAAAAAAAGAATTAGAGAATAATAAATAGCGAAGTAGAATTATGAGAGTGACATTGACATGGTGTGATGATAATGGTGATGTTACATT ACAAAATACAATGCTAAGAATCTCATTTATACTATTGAGGAAACGGATAAGAAAATAATTAATAAAAAGTATCCCCCACGAGATCTTGTTAAGCACTCTA AAATGTTATTGGATACAATAAAGATATTTCAAGATAGTTTCTAGATATTCTAACACTCCCTCAAGCAAATGCTTAGTAAGCTTTGAACTTCTTACAAATG AACTAGGAGGGAATAATCGCACTTATTCTTACTTGTCAGTTGTAATTGTAAAGATGTCAGTATTTTGCTGCTCTGTAATGCCCAAAAATAGTATTTAATA CCATTTTTACCCTTTTTATAGCATTTTGGGGAAATAAAAAGTGTTCATTGTTTCTTTTTGAGGATATCTTATGCTCTTTTCATCTAGTATACTTCCTTTT TATCCGAAAAAGAAGTGTTGATCGTAATGGATGTAGCATATGTATTATCTCGTTTGGATGTTAACCCATTCATTTTTTTTCATAGAAGTAGTTGCCATTT CATGTTTATCATAATACTCAAATACTTGACATTTAGCTAATGGGAGACCAACACTCAATCTTGAGAGAAGTTTGGATCATGATGGGCATCCTCTTGCCAT TACCACAGCTGAAGCTGTTGCAGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAAACTCCTGAGAATGGTAAGCTATGTAAAATTTTGTAGCTTGATGTG AGCTTAATCACCAATGGATGACAACAATGGCAAAGAATATAAAAGTTAATGGCTTTATTTCTTAATAATATATGTATTGTAAGTGTGGATAGGTTAATGT TTTGAAGAATTTTTGTAGAATCTAAAATAAGTTTGGTTAGTTCCATTCCGACCCCCTCCCCTCCTTTTTTTCTTTTTCCTCTCTAGCTAAAGATGAGTCT TGGCGCAACCATAACATTACTGCTCTCTCCTGACATGGAGGTCACGAGTTCAAATATTGGAAACAGTCTCTTTACTTGTGGAGGTTATTGCACTAGGCCA CCAATTTTCTCTCTAGCTACTAGAGTGGCCATTATACTTTCTTATTTTTGCTTCTGGTTCTTCCTATTTTAGCAGGTGGGGAAAGTCAGTCATGTTGTGG AAGGGTTATATCGGTGAAATGGGGTGATTATACAAGACGTATTGGTATTGATGGCACTGCAGAAGCCATTAAGGAGGCAATTAGGTCTGCTTTTAGATTG AGAACTAGACGTGCATTTTGGTTGGAGGATGAAGAACAAATTATCAGAAGTATTGACCGTGACATGCCCTTAGGAAATTACACTCTTCACCTTGATGAAG GAATGGCTGTTAAAGTATGTCTCTATGATGAGTCTGACCATATCTCTGTGCACACTGAAGAGAAGATCTTCTACACTGAAGATGATTACCGTGATTTTCT GACGCGCCGAGGTTGGACATGTCTAAGGGAGTTTGATGGCTATAGAAATATTGACAATATGGATGATCTTCGACCTGGTGCCATATATCGTGGTGTGAGT TGAGAGTGCAGGTGCAGGTACATGGTATGATCGATGTTTAGCTGTTTAACTATAAGATGAACTTGGGTGGGAGGAGACTGTTTATGTCAGTACTATACGT GTAATATTTAAGTTTGTAAAATGCTGCTTATCTAATCTACTATAGAAAATGAACTATGGCCCATGCACAGATTCAGTTCCAATCATTGGCCTCAACATGT CTGTAAATAACTAAATATGCATTTGCTGATCAAACATATTGATTACTGTTTTGGAAATTAGGACTTGTCATATAGGAATGTATGTTTAACTATAAGATAA TTGAAAGACAAACAAAGAATATGAAGTATGTAGTCAATCAATTTTTGTAGGTAATAATTGGTAGGAGCTGTTGGGTTTGTTAGGAAGTGATGTTCATGTA TGTCTCCCATGGAGAATGACAGAGTTATATGAGAGTGCAGAGACTTAATTCACAGCGTTTGGATTAAAATGAATGACTTAGATTAGATACCGCT
• Tissue: pods
• Gene name: LI_gene_181592;
• Additional information: details;

Expression of Ll_transcript_389050

FPKM

• PAB: 3.7
• PNAB: 1.6
• PS1: 5.2
• PS2: 3.8
• PS3: 2
• PW1: 3.8
• PW2: 4.7
• PW3: 3.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_389050

• Blastp: Trihelix transcription factor GT-1 from Arabidopsis with 61.71% of identity
• Blastx: Trihelix transcription factor GT-4 from Arabidopsis with 76.6% of identity
• Eggnog: DNA binding protein GT-1(ENOG410XUBM)
• Kegg: Link to kegg annotations (AT1G13450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417471.1)
• Pfam: Myb/SANT-like DNA-binding domain (PF13837.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;