Ll_transcript_387154

• Id Trinity: TRINITY_DN50996_c4_g1_i30
• Name Transcript: Ll_transcript_387154
• Sequence: ACTTTATTAAACAGAGCAGCACTCTCTCGTTTTCATTCTTCCACCTTCATCTTTCATTCCATCCCTTTCTGATTCGATTTTCTGAATCAATCTCGCGTTC CCTCCAATTCCCACTATAATCTCAAAATCTCGCCACTCGTAGTGTTAGTTCTCTTTCTCATCACTCAACTTCAAAAAATCCCAATTCGAAACCCTAGCTT CCATCTCCTTTCACCGCAAACCCTAACTTCCTTCCATGGCGTCAAAGAAGAAGCAACCCGAAGGTATCGCGTTGCTATCTATGTACAACGATGATGAAGA CGATGAAATGGAAGACGTTGAAGAAGAAGAAGAAGAAGAAGACGGAGATGGAGAATTCGCGGATGCAGGGATTCGTGGCGGCCAGAACCACCAGGATCCC GCCGCTGATAACGCAGCGGATGATGATTTGGCTGCCGACACGGATCGAATGGCAGTTATTGATTCTGGTAACGATGCTGTGGACACTCTTACGCCTCAGC AGTTGATATCGCCTCAGGAGCAGCAACGGTTGAGTCGGAAGAGGGAGAAGCTCACGATAGTGGACTATGGCCATGATGAAGTAGCAATGTCACCTGAACC TGAGGAAGGAGAGATAGGTCTGAGTGGTCATGTTATGATTGGGGATCAACTTCATGTCACCAATGGTGATTTTATGGATAGAACACCATCTGGAACAGTC CGAGTTTTGACACCTAGCTATCAAGCTAACAACCCTCAGTTCTCTGAGCCATTGAAATCTGATGCCATGAACAGTGATGCTTTGATCGGATCAGATGATG CAGAAATTGGGGAACCAGATCAAGATGAACAAAGATCTGTAAACCCATTGGATAAGTTTCTCCCTCCACCACCAAAAGCTAAATGTGCAGAGGAGCTACA AAGAAAAATAAATAAGTTCCTAGATCTTAAGAAGACTGGAAGAAGTTTTAATGGAGAAGTTCGTAACCGGAAGAACTATCGTAACCCTGACTTCCTACTG CATGCAGTGAGGTACCAGGATATTGATCAAATAGGGTCTTGCTTCAGTAAAGATGTATTTGACCCTCATGGATGTGATCCAAGCGACTTCTATGACGAAA TAGAGGCTGATATGAAGCGTGAAAGTGATAGGAAAGAACAAGAGAAGAAGAAAGCACCAAAGGTTGAGTTTATCCCTGGGGGAACACAACCAGGAATTGT AGCTGGTGCTCCAAGGATCAGTTTGCCTGTTGCAGGTGGTTCCTCTGTGACTAGCGGTTTGCATTTGGTGCATCCTACAACAGATTCTGTTAATCGGGAT GGTAGACAGAACAAAAAATCAAAATGGGATAAGGTGGATGGCGATGGAAAAAATCCTCTGCCATCTGTGGGGCAGGATTCTGTTTCTACAGTTGGTGCAA ATACAGCAATTTTATCTGCTGCGAATGCTGGTGGTGGCTACATGCTATTTGCGCAGCAGAAACGGCGAGAGGCCGAGGAGAAAAGATCTAGTGAAAGGAG ATTTGAGAGAAGATCATGAGCCATTTTATTTTGATCTAGTAACTAACACCGTTCATACATCTATGGTTGATGTTTTTTCGAGTAACATTTTTGTCTGTTC AGTATTAACTTTGGCCATGAATGTAGTACATTATATATCATTACAAATGAAGAGAAATTTGCTGTCCCAATTTTACCTAATGCCATATCCCCGTGACTGG CAAATTCATTTCTATTTGATTCCGCTGCAATGTTGTATTGTTATATTTTCTGTTGATTGATAGGGGTTCGTTGTTTTGTTTTGCATGATGTGCTGTCTTA TGTATATCTTTGGATTAATACTAGCATAGTCTGTTCTTAAGGCGTTCTTTTGGAGACCTATTTTCAAGGGGAAGGACAGGAAAGGAATGACTTACGAGGG GATTCCTTTATTTGGGAATTTAGTTAGAGAAGAGGGAGGCTTTTGGAGTATTTCTAAAACCCGTTATACCATTTTTTGGTATCCCCCATACTTCGG
• Tissue: pods
• Gene name: LI_gene_181620;
• Additional information: details;

Expression of Ll_transcript_387154

FPKM

• PAB: 14.4
• PNAB: 8.9
• PS1: 11.8
• PS2: 8.3
• PS3: 11.3
• PW1: 6.5
• PW2: 7.6
• PW3: 6.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_387154

• Blastp: SAP30-binding protein from Homo with 33.91% of identity
• Blastx: SAP30-binding protein from Mus with 33.91% of identity
• Eggnog: SAP30 binding protein(ENOG4111K05)
• Kegg: Link to kegg annotations (29115)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419851.1)
• Pfam: HCNGP-like protein (PF07818.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;