Id Trinity | TRINITY_DN50996_c4_g1_i4 |
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Name Transcript | Ll_transcript_387127 |
Sequence | ACTTTATTAAACAGAGCAGCACTCTCTCGTTTTCATTCTTCCACCTTCATCTTTCATTCCATCCCTTTCTGATTCGATTTTCTGAATCAATCTCGCGTTC CCTCCAATTCCCACTATAATCTCAAAATCTCGCCACTCGTAGTGTTAGTTCTCTTTCTCATCACTCAACTTCAAAAAATCCCAATTCGAAACCCTAGCTT CCATCTCCTTTCACCGCAAACCCTAACTTCCTTCCATGGCGTCAAAGAAGAAGCAACCCGAAGGTATCGCGTTGCTATCTATGTACAACGATGATGAAGA CGATGAAATGGAAGACGTTGAAGAAGAAGAAGAAGAAGAAGACGGAGATGGAGAATTCGCGGATGCAGGGATTCGTGGCGGCCAGAACCACCAGGATCCC GCCGCTGATAACGCAGCGGATGATGATTTGGCTGCCGACACGGATCGAATGGCAGTTATTGATTCTGGTAACGATGCTGTGGACACTCTTACGCCTCAGC AGTTGATATCGCCTCAGGAGCAGCAACGGTTGAGTCGGAAGAGGGAGAAGCTCACGATAGTGGACTATGGCCATGATGAAGTAGCAATGTCACCTGAACC TGAGGAAGGAGAGATAGGTCTGAGTGGTCATGTTATGATTGGGGATCAACTTCATGTCACCAATGGTGATTTTATGGATAGAACACCATCTGGAACAGTC CGAGTTTTGACACCTAGCTATCAAGCTAACAACCCTCAGTTCTCTGAGCCATTGAAATCTGATGCCATGAACAGTGATGCTTTGATCGGATCAGATGATG CAGAAATTGGGGAACCAGATCAAGATGAACAAAGATCTGTAAACCCATTGGATAAGTTTCTCCCTCCACCACCAAAAGCTAAATGTGCAGAGGAGCTACA AAGAAAAATAAATAAGTTCCTAGATCTTAAGAAGACTGGAAGAAGTTTTAATGGAGAAGTTCGTAACCGGAAGAACTATCGTAACCCTGACTTCCTACTG CATGCAGTGAGGTACCAGGATATTGATCAAATAGGGTCTTGCTTCAGTAAAGATGTATTTGACCCTCATGGATGTGATCCAAGCGACTTCTATGACGAAA TAGAGGCTGATATGAAGCGTGAAAGTGATAGGAAAGAACAAGAGAAGAAGAAAGCACCAAAGGTTGAGTTTATCCCTGGGGGAACACAACCAGGAATTGT AGCTGGTGCTCCAAGGATCAGTTTGCCTGTTGCAGGTGGTTCCTCTGTGACTAGCGGTTTGCATTTGGTGCATCCTACAACAGATTCTGTTAATCGGGAT GGTAGACAGAACAAAAAATCAAAATGGGATAAGGTGGATGGCGATGGAAAAAATCCTCTGCCATCTGTGGGGCAGGATTCTGTTTCTACAGTTGGTGCAA ATACAGCAATTTTATCTGCTGCGAATGCTGGTGGTGGCTACATGCTATTTGCGTAAGTCTGTAAACAACAAACTGGAACTTTATGCATTCTATTCTATTC CCTTGTCTATTGATTCGGGTTTGACTTTCAGTTTATATGTTCTGGTGATGGTTTGGCACATTTTTCTTTTTTATTGTGTAGATATTTTGAAGCTTCATTT GCATGCTATCAATTTGAATACATAGTATCTTCTAGAAGAAACTATAATCTATAATTAACATACAAGTAATGGCCTGATTTGACTTGTGCGATTTGCAGAC ATTCCCAAATCCCAATTACAGAATATTAGCTTTGAATAGTATGAAATGCATATCCCAATATTATTTTTGGTATCTAACAGTTTCTTGCTGTGTTAAACCA TCATGCAATGAGAATAGCGAGATCTTAACTTAGTATCCTAAACCATCATGCTCAGACATTTTAATTTTTAAGTGGCAGCTTGTAGGTCTGTAAGACAGCC AAGTCTGTAATTTATGCTTGCAATGATTCTTAATGTGCTTCTGTCAAGTTATATGCTGTTTCAGTTTTCTGGGTTATCAATAAATTCAGTTTTTACGAAG TAAAATTTCTTAAGTTCCTAATTTACTTTAGGTTGAGTCATAATCTACGTTTTCTTTACTTGAAGGGTCTAACTTGTACCTTGAGTTATGGTCTGTGACT GCCATTTCATGTAATTGACAATCAAATGGCTGTATTATCTGGTTCTGATAATTATCTTTTATCTAAGTAATATATATTTGATACAATGGTCAATGTTCTG TTGTTAAACAGGCAGCAGAAACGGCGAGAGGCCGAGGAGAAAAGATCTAGTGAAAGGAGATTTGAGAGAAGATCATGAGCCATTTTATTTTGATCTAGTA ACTAACACCGTTCATACATCTATGGTTGATGTTTTTTCGAGTAACATTTTTGTCTGTTCAGTATTAACTTTGGCCATGAATGTAGTACATTATATATCAT TACAAATGAAGAGAAATTTGCTGTCCCAATTTTACCTAATGCCATATCCCCGTGACTGGCAAATTCATTTCTATTTGATTCCGCTGCAATGTTGTATTGT TATATTTTCTGTTGATTGATAGGGGTTCGTTGTTTTGTTTTGCATGATGTGCTGTCTTATGTATATCTTTGGATTAATACTAGCATAGTCTGTTCTTAAG GCGTTCTTTTGGAGACCTATTTTCAAGGGGAAGGACAGGAAAGGAATGACTTACGAGGGGATTCCTTTATTTGGGAATTTAGTTAGAGAAGAGGGAGGCT TTTGGAGTATTTCTAAAACCCGTTATACCATTTTTTGGTATCCCCCATACTTCGG BLAST |
Tissue | pods |
Gene name | LI_gene_181620; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_387127
Blastp | SAP30-binding protein from Homo with 33.91% of identity |
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Blastx | SAP30-binding protein from Mus with 33.91% of identity |
Eggnog | SAP30 binding protein(ENOG4111K05) |
Kegg | Link to kegg annotations (29115) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419851.1) |
Pfam | HCNGP-like protein (PF07818.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |