| Id Trinity | TRINITY_DN50997_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_388571 |
| Sequence | CACCTCCTCATACTAATGCTCCTCCACCACCGCCTCCACCTCCATTTGGTAGAGCTCCCCCGCCACCACCTCCACCTCCTTATAGCAGTGCTCCTCCCCC TCCACCTCCACCTCCATTTGGTAGAGCTCCTCCATCCCCACCACCACCTCCTCAATCAAGTCGAGCCCCACCTCCACCTCCTCCACCTGCTCATGGAGCC CCACCACCACCTCCAATGCATGGAGCCCCACCTCCTCCGCCCCTTCCTGGTGGTCGAGGACCTCCTCCTCCGCCCCTTCCTGGTGGTCGAGGACCTCCTC CTCCACCCCCTCCTGGTGGTAGAGGACCACCTCCTCCGCCCCCTCCTGGTGGTAGAGGCCCACCTCCCCCACCTCCTCCTGGTGCTCCCGGTGCTCCTCC TCCTCCTAGACTTCCTGGTGGTGCACCTCCACCACCTCCACCAAAAGGTGCAAATGTTGGAGCTGATCCAAGAGGGAGAGGGCGTGGTGGATATGCACGC CCAGGAGGACCTGGTGCTATGACAGCACCCAAGCGATCCTCTTTAAAGCCTCTACATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAAG AATTACAAAGACACGGAGAACCTCAAACTGCATCAGAGTTTGATGTATCAGAGTTAGAGAAGCTTTTCTCTGCAAATGTTTCCAAAACTGCTGACTCTAA AACTGGTGGGCGGCGCAAATCTGTTGGATCTAAAACCGACATAGTCCACTTGATCGACCTGAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTT AAGATGCCGCTTCCTGATATGATGGCTGCAGTACTGGCTATGAATGAGTCAGTATTAGATGTTGACCAGGTGGATAATCTCATTAAGTTTTGTCCTACGA AAGAGGAGATGGAACTTTTGAAGGGATACACAGGTGACAGGGCGAACTTGGGGAAGTGCGAACAGTATTTCTTGGAGATGATGAATGTGCCACGGGTGGA ATCAAAATTAAGAATATTCTCTTTCAAGATTCAGTTTGGGTCTCAGGTTACAGAATTTAAGAAGAGTTTAATCACTGTGAACTCTGCCTGTGAACAGGTT CGAAATTCTGTCAAACTGAAGGAGATCATGAAGAAAATTCTTCTTTTGGGTAATACATTGAATCAAGGAACAGCACGGGGGTCTGCAGTTGGATTCAAGT TGGATAGTCTCTTAAAGCTCACCGACACTCGTGCTACTAACAATAAGATGACACTAATGCATTATCTTTGCAAGGTCCTTGCTGAAAAGTCGCCTAGACT CCTCGATTTTCGCCTAGACCTTGTTAGCCTGGAACCTTCCACCAAGATACAATTGAAGTCTTTAACAGAAGAGATGCAGGCAATCATCAAGGGATTAGAA AAGGTTAAACAGGAGCTTGCTGCATCTGTAAATGATGGACCTGTGTCCGATGTTTTCCGTAAGACATTGAAAGGTTTCATAGATGTAGCTGAGTCCGAGG TGGCATCTCTAACAAATCTATTTTCTGTGGTGGGTAGAATTGCAGATGCACTTGCACTATACTTTGGCGAGGATCCTGCTCGCTGCCCATTTGAGCAAGT TACTGTAACTCTCTTAAATTTTGTGAGGTTGTTTCGGAAAGCACATGAAGAGAATTGCAAACTAGCAGAGCTAGAGAAGAAGAAAGCTGAAAATGAGGCT AATATGGAGAAGGCGAAGGGCAAGACAAAGAAGAGCGCAAAAGATAGTTGACAATTGGGTGATTCGCTCCTTTGATTTAACATCATGCCCCGGAAGAGCA GGAAACTACCCATGTAAGGGGCTCGCTCCTTCAGTGACAAGTTAAGAAGTCTTCCCTTTCGATGACTACGCGAAAATTAGCATTTCAAGCTGATTGGTTG AGCTGGAATAGCAAATGTCTGCCAGCTTCGGACCGTTGAACACACAACAGGCCTCGGAGTTGATTCTTTGATGGCGTGTTGTTGAATCAGATTTATATCG CCAATTGATTTTTTCATGTCAGACTACTCTGGAAAGTCCAAATTTAGACGTCGGTACGATACACCGCTCGCATTGTTTAAAAAAGAAATTTTGTAGTAGA GCATATTTTTTGTGGTACCAGAGCAGATGCATTTAGGATTTTAGAAACAATGAAGTCCAACACTAGTACTATGAAACCTTGGGCTCTTAACCTTTCCTAG GATTCAATTCTTTGTCCCTTTTTGATAGATTTTGGTAGGTACCCTCAAGAGAATGAATGTTGTGCAGATATGTCAGGTTAAAAGAAATAGATATCAAGTT ACTGTATTGTAAGTGTAGTATAAGCCAGGCTAGATATGCTATTTTCATTTTTTTCATGTTTGAAATACAATTAGAAGTATTTGAGTGTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_181624; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388571
| Blastp | Formin-like protein 20 from Arabidopsis with 77.4% of identity |
|---|---|
| Blastx | Formin-like protein 20 from Arabidopsis with 79.95% of identity |
| Eggnog | FH2(ENOG41100UH) |
| Kegg | Link to kegg annotations (AT5G07740) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463427.1) |
| Pfam | Formin Homology 2 Domain (PF02181.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |