Ll_transcript_388569

• Id Trinity: TRINITY_DN50997_c0_g1_i9
• Name Transcript: Ll_transcript_388569
• Sequence: CACCTCCTCATACTAATGCTCCTCCACCACCGCCTCCACCTCCATTTGGTAGAGCTCCCCCGCCACCACCTCCACCTCCTTATAGCAGTGCTCCTCCCCC TCCACCTCCACCTCCATTTGGTAGAGCTCCTCCATCCCCACCACCACCTCCTCAATCAAGTCGAGCCCCACCTCCACCTCCTCCACCTGCTCATGGAGCC CCACCACCACCTCCAATGCATGGAGCCCCACCTCCTCCGCCCCTTCCTGGTGGTCGAGGACCTCCTCCTCCGCCCCTTCCTGGTGGTCGAGGACCTCCTC CTCCACCCCCTCCTGGTGGTAGAGGACCACCTCCTCCGCCCCCTCCTGGTGGTAGAGGCCCACCTCCCCCACCTCCTCCTGGTGCTCCCGGTGCTCCTCC TCCTCCTAGACTTCCTGGTGGTGCACCTCCACCACCTCCACCAAAAGGTGCAAATGTTGGAGCTGATCCAAGAGGGAGAGGGCGTGGTGGATATGCACGC CCAGGAGGACCTGGTGCTATGACAGCACCCAAGCGATCCTCTTTAAAGCCTCTACATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAAG AATTACAAAGACACGGAGAACCTCAAATTGCACCAGAGTTTGATGTATCAGAGTTAGAGAAGCTTTTCTCTGCTAATGTTCCAAAGCCTGCTGAATCTAA AACTGGACGGCGTAAATCTGCTGGATCTAAACCCGAGAAAGTCCATTTGGTTGACCTGAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAG ATGCCACTTCCTGATATGATGGCTGCGGTACTTGCTATGGAGGAGTCAGTATTAGATGTTGATCAGGTGGATAATCTCATTAAGTTTTGTCCCACCAAAG AGGAGATGGAACTCTTGAAGGGATACACAGGCGACAAGGAGAACTTGGGAAGGTGTGAACAGTTTTTTTTGGAGTTGATGAAGGTACCACGGGTGGAATC AAAATTAAGAATATTCTCTTTCAAGATTCAGTTTGGGTCTCAGGTTACAGAATTCAAGAAGAGTTTAAATACTGTGAACTCTGCCTGTGAAGAGGTCCGA AATTCTGTCAAACTGAAAGAGATCATGAAGAAAATTCTTTTTTTGGGTAATACATTGAATCAAGGAACTGCACGGGGGTCTGCAGTTGGGTTCAAGTTGG ACAGTCTCTCAAAGCTCACCGACACCCGTGCTACTAACAATAAGATGACACTGATGCATTATCTTTGCAAGGTTCTTGCTGAAAAGTCGCCTGGACTCCT TGATTTTCACCTAGACCTTGTTAGCCTGGAACCTTCGACCAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCACCAAGGGATTAGAAAAG GTTAAACAAGAGCTTGCTGCATCTGTAAATGATGGACCCGTTTCTGACATTTTCCGTAAGGTTAGCTCTTTCATGTCAGGCTCTTGATTCTTTATATTAG TGTGGGAAATGACAATAAATTGACGTAGATCATATACTGGTTTTCCTGCACCATGAATGTAATTGAGTGTAGTTACATTGACTTGGGATCAAGAGAGAAC AGAAGTTCACACATTTCACTAATGGGGATCTCAATAATTTTATTATATAACATTGACTTGGGATTTCCAAAACACGTAATAAATTATATTTCTCAATGAT TGCAGAATCCTTATTTTTTCTTTATATTTTCTCATTGGTTCTAGTTGTTTGTCAGTCTAAGCTTTTCGCATGTAAGCACACTTTCTTATTATCTAGTTGA CATCACTGGATTTGTTTTTTCTCTCTCTTTGCAATGTTCTTTTCAGACATTGAAAGGTTTCATAGATGTAGCCGAGTCTGAGGTGATATCTCTAACAAGT CTATATTCCGTGGTGGGTAGAAATGCAGATGCACTTGCATTATACTTCGGTGAGGATCCTGCCCGTTGTCCATTTGAGCAAGGTAAGTTGAGGATTAATA CTTATTCATGTTGTCAGCATGTCATGCATTGGTCTTCTTACTGATGACTTATTTTATTTGATTATAGTCGATCAACTTTATTTAATTGATGTTCATGGAG AAAGCACACTTTCATGGTTTGTTGCATTTATAGTTGGGACATGTGCGTATTACCGAAAAATTAGGTTGATTTAGAAGTGTTTTTCTTGGCTACGGATAAG GATTAAGGAAAGTGACTGTAAGTTCTTGATGTTTCTAATGGAATCTGCACCAAGACACTTCAAAGCTTTCCTTAAAGTGATAGGTTTGATAATAAGTTGT TCAATTGATAGAAATCTGTCCTCCTTGGATCCTTGTGTAAGCAAAAGAAAGAAAGTTGAGAGAAGGGCAGGGGGGAGAAAGAGAGAATAGTCGAGGAATA ATAAAGATGAATAAGCCACATGAGGCTATTTCATTGACATTTGTTATTATGGTGCACATTCAGAAGGTGTCCTCATTTGTTATTACATTGTTCTTGCCTC TTACATTGTGGAATTGTTTTTGGTATTTGTAGAGAATGCTGGGTCTTCCCTAGGTCCTTGGACCTGTTTCAGTTATAACTGGTTTTGAGAGGAGGACCTC TTATCCTCTGCACTCTTTGTATTTATGTTCTCTTGTCATAATATATTTCGTGTATATAATAAAAGAAAACACAGATAACTAATGGGGAAAAGTCGATGGG ACGACTAAACTCAACAAAGTTCCATCATCCATGTGTGTTTCTGATACTTTGTTTGGAAAAAGGTGCTGATATGTAGTTCTACCTTTTCTACAATGCTCAG GTTAACTTCTTATCATTGCTGGTTTTATGGTTGCAGTTACTGTAACTCTGTTGAATTTTGTGAGGTTGTTTCGGAAAGCGCATGAAGAGAATTTTAAACA AGCGGAGTTAGAGAGGAAGAAAGCTGAAAAAGAGGCTGAAATGGAGAAGGCTAAGGGTGTTAATTTGACAAAAAAGATTGCAAAAAATAGTTGACAATTT GGTTTTTTACTCCTTCGCATTGACATCATGCTCTTGCGGAAGAGCTCGCAGAAAAGCAGGAAACTACCTATGGTAGTAAGCGGACTGCTCCGGAGACCAG TTTTAAGAAGCCTCCCTTTCCATCATGACGACTTCACGAAAATTAGCCTTTCAAGCTGACCATTTGAGGTGAACGGAATAGCAAATTCCTGCCACTGTTG AACCTTTGGACACACAACAGGCTTAGGAGTTTGATTCTTTGATGGCGTGCTGTTGAATCAGATTTATATGGCCAATTGATTTTTCATGCCAGAATGAATA CTCAGGATAGTCCAAATTTTACCCAAGACTGGATTGGATGCTTACTGTGATGTGATTGCTTGAGATGCCATCTGCATCCAGTGAATTCTACAGAAATGAT GGATCTGGCAATTCTCTCCTGTTGTTTGAAGAAATTTTGTAGTAGAGCATATTTTTTGTGGCACCAGAGTAGATGCTTTTTGGATTTAATAAAAATGAAG TCCAACACTAGTACCATGAAACCTTGTACAAATTAGGATCCAATTCTTTCTCATGTAACATAGAAATTAGTGTCCTTTTTTTATAGAGATTTTGGTAGGT ATCCCTCAAGGAGATGTTGTATAGTTGTGAGATTAAGAGAAATAGATATCAAATCACTGTATTGTAAGTGTAATATAAGTGAAGAGCAGGCCAGGCTAGA AATGCTAGTTTCATTTTTTCATGTGAAATACAATACCTATGTAGTGAGATGTAAAATGTTATTGTTACATTCTGTTGTCTGACTTGTCTCAACTCATGCA ATTTATTTTTTCAAATGTAATACCATTTATCATAACTGTTGAGATTTCATTTGGTAAGGAC
• Tissue: pods
• Gene name: LI_gene_181624;
• Additional information: details;

Expression of Ll_transcript_388569

FPKM

• PAB: 6
• PNAB: 9.4
• PS1: 8.4
• PS2: 5
• PS3: 7.7
• PW1: 7.1
• PW2: 9.5
• PW3: 8.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388569

• Blastp: Formin-like protein 20 from Arabidopsis with 78.59% of identity
• Blastx: Formin-like protein 20 from Arabidopsis with 79.94% of identity
• Eggnog: FH2(ENOG41100UH)
• Kegg: Link to kegg annotations (AT5G07740)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438429.1)
• Pfam: Formin Homology 2 Domain (PF02181.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;