| Id Trinity | TRINITY_DN50998_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_387549 |
| Sequence | TTAGTGACATAGTTACATACATAACTCAGTCTTTTAGTTACAAAGTTAGTGACATAGTTACATACATAACTCAGTCTTTTAGTTACAAAGTTAGTGACAT AGTTACATACATAGTAATATGGTATAGTAGATCTTAGTATTCTTCAGTTCATCATGTCTTCTGGTAATGGGAGTGATGAAAAGAGGGAAAGGAAATCTGA TATTGATAATTCAGAAGATGAAAATAGTAGGAGTAGGAGGATTATGAAAGGTAAAGGAATTGGATCTCTTAAAAAGAAGGCACTGAATGCATCTTCCAGA TTCAAACATTCTCTTCAAAACAAGACTCTTAAGAATACCCGTGTCACTTCTGTTTCCATTCAGGATGTTCGTGATCTTCATGAGCTTCAAGCCGTTGATT CCTTTCGACAATCCTTGATCATGGATGAGTTACTTCCACAACCATATGATCATTACCATATCATGTTAAGATTTTTGAAAGCAAGGAAATTTGATATTGA AAAGGCAAAGCATATGTGGGCAGATATGCTACAATGGAGGAAAGAGTTTGGTGCTGATACCCTTATGGAGGATTTTGAGTTCAAAGAAATAGATGAAGTT GTAAAGTATTATCCGCAAGGCTATCATGGTGTTGATAAGGAGGGCAGACCTGTTTACATTGAAAGACTTGGAAAAGTTGATCCAAACAAACTGATGCAAG TTACCACTTTGGATAGATATGTAAAGTACCATGTACAGGAGTTTGAGAAAACTTTTACGATAAAGTTTCCTGCTTGTACAATAGCTGCCAAAAAGCACAT AGATTCAAGCACCACAATTTTAGATGTTCAAGGCGTGGTATGCTGCTATTCATTGTTCCTAATTGCATTGCCTGCTAATTTCTTTAACACAAAAAGTGCT ATGATGTCAACTTTTAGGGCCTTAAGAACTTTTCAAAGACTGCCCGGGAACTCCTTCAGCGAATACAGAAGATTGATGGTGACAATTACCCTGAGACGTT GTCCCAAATGTTTCTCATAAATGGTGGCCCCGGATTTAGGTTGCTTTGGAACACTGTCAAGTCTTTTCTTGACCCGAAAACAGCTTCAAAGATCCATTTT CTCGGAACCAAATACCAAAGCAAATTGCTTGAAGTAATTGATGCCAGTGAGTTGCCAGAATTTCTGGGAGGCACCTGCACCTGTGCGGATCATGGAGGTT GTCTAAGATCTGATAAAGGGCCATGGAAAAACCCTGAAATATTGAAGATGATCAAGAGTGATGAAGCACGGTGCCCAAGGAAGCTAGTAAAAGTTCTAAA CAGTGATGGAAAGGTTATTGCATATGCCAAACCAGGACACCCAATGGGAAAAGGCAGCGATACATCCACAGCTGAATCAGGGTCTGAAGTTGAAGATATA GCTTCTCCAAAAGCAGCGCATAATTGCTCGCACCTTAAGTTGACCCCAGTTCACGAGGAAGCTAAGGTAGTTGGAAAGTCAAGCTATGCCGCTAGTTGTA ACCTTTCTGGGTATGATGAATTTGTTCCAATGGTGGACAAAGCTGTTGATGCTGTTTGGAAGGAGCAAGTTCCCCTCCAGTGGTCTCATGCTTCAAAAGA AGCACCTCCCCCTCTTGACACTCCAAAACCTCCAGAAGGGATTCGAGCTCGGATTTGGATTGCGCTGACTGCCTTCTTTTTTACTCTGTTTACTCTCTTT GGTTCATTTACTAGCCGTGTGACGAAGAAGCTTCCTGCAGTATCATCTAATGATTGTCAAGGCACTTCAGAGCCAACTTCTGATGCAAAAAACAAGGATG GCATGCATACCGAGGAAAATTTCCAATCCTCCATGTTGAAAAGGTTATGCGAGCTTGAAGAGAAGGTTGACACACTCAAATCTAAGCCATCTGAAATGCC TTATGAGAAAGAAGAGCTGCTAAATGCTGCCGTGTGCCGGGTGGATGGTTTGGAAGCAGAGTTAATCGCAACTAAAAAGGCTCTCTATGAGGCATTAATA AGGCAAGAAGAGCTGCTTGCTTATATTGATAGACGAGAACAAGCTAGATTACGAAAGAAGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_181631; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_387549
| Blastp | Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 from Arabidopsis with 60.71% of identity |
|---|---|
| Blastx | Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 from Arabidopsis with 63.5% of identity |
| Eggnog | Transfer protein(ENOG410XRSQ) |
| Kegg | Link to kegg annotations (AT2G21520) |
| CantataDB | Link to cantataDB annotations (CNT0000925) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448484.1) |
| Pfam | CRAL/TRIO domain (PF00650.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |