| Id Trinity | TRINITY_DN50998_c1_g1_i22 |
|---|---|
| Name Transcript | Ll_transcript_387573 |
| Sequence | CTTGACTTTAACCGAATTGATGAGATAATTGATTACTACAGAGAGATATACAGAAACAAAATCCTTTATATTATTCATTCTCATTCTTAATCAACAAACA ACATTCTTTTTCTGCTTCACAGCTAGCTTCACACGCTACTCCACTACACGCGCCATTCTCTTCTCTTCTTTCTTCTTCAACTCTTATTATTAGGGTTTCG TGAATTCATTGATCACCGTTATAATATTCTTCACTATGTCAGGCCCACTCGATCGTTTCGCCAGACCCTGCTTTGAGGGGTTTTCCGGAAGTGATGAGAA AAAGGAAAGGAGATCCGACTTTGAGAACTCCGAGGATGAAAGGAGGACAAAAATTGGATCTTTAAAAAAGAAAGCCCTCAATGCATCTTCCAAATTCAAA CATTCTCTAAAGAAGAAGAGTAGCCGGAGGAAAAGCGATGGCCGTGTTAGCTCTGTTTCCATTGAGGATGTTCGGGATGTCGAGGAGCTGCAGGCTGTTG ATGCATTTCGCCAATCGTTGATTATGGACGAGTTGCTTCCAGAAAAACATGATGATTACCATATGATGTTAAGATTTCTGAAAGCAAGGAAGTTTGATAT TGAAAAAGCAAAGCATATGTGGGCTGATATGCTACAATGGAGGAAGGAGTTTGGTGCTGACACTATTTTGGAGGATTTTGAGTTCAAAGAGCTAGATGAA GTTTTAAAGCATTATCCACATGGGTATCACGGTGTTGATAAGGAGGGTAGACCTGTTTACATTGAAAGACTCGGAAAAGTAGATACAAACAAACTGATGC ACGTTACAACTATGGATAGATATGTAAAGTACCATGTACAGGAGTTTGAGAAAACTTTTGCAGTAAAGTTTCCTGCTTGCGCAATAGCTGCCAAACGGCA CATAGACTCAAGCACCACAATCTTAGATGTTCAAGGCGTGGGCCTTAAAAACTTTTCAAAGTCTGCACGGGAACTACTCATGCGTATACAGAAGATTGAT GGTGACAATTACCCAGAGACACTGTGTCAAATGTTTCTCATAAACGGTGGCCCGGGATTTAGGTTGCTTTGGAACACTGTCAAGTCTTTTCTTGATCCAA AAACAGCTTCAAAGATTCATTTTCTCGGAACCAAGTACCAAAGCAAATTGCTCGAAATAGTTGATGCCAGTGAGTTGCCAGAATTTTTGGGAGGTACCTG CACTTGTGCGGATCATGGAGGTTGTCTCAGATCTGATAAAGGGCCATGGAAAAACCCTGAAATATTGAAGATGATTCTGAGTGGTGAAGCACGGCGCCCA AGGCAGGTAGTAAAAGTTCTAAACAGTGACGGAAAGGTTATTGCCTATGCGAAACCACGATACCCAATGGTAGTTATTTGTGTGAAACATTTTTACTGCT TGATGTGGGGGGGAATTGCCTTGCCCCTTTTTTGTGTAGCTCCATTGATTCTATGACCTACTTTTTGCAGGTAAAAGGCAGTGATACATCCACAACTGAA TCAGGGTCTGAAGCTGAAGATATAGCTTCTCCAAAAGCGGTGCATAATTACTCACACCTTAGGTTGACTCCTGTTCGTGAAGAAGTAAGTGTTAACCTTT TGATTCGTTTATTCATTGCTTTCATTACGTGGCAGAAGTTTTAATTGATTGAATGTAGGTCTTTTGTGAAACCCTCCTCTTCATAAGTTGAATGGCAGCA AATTTTTCTTTGGTCATCCTTATTCTGTTAGTTTAATGTGTACTCATTTAAGTGTACAACAAATATTCACAATATTTATGGATACCATGAGGATGATCAA AATAGAGCGCTTGTCAATAAGCCTTTTTATACAATTTGCCGTGGTCTATCCGAAAGACAAACATTTTTAATATTGTGTTCTCTTTGTCAGGCTAAGGTAG TTGGAAAGTCAAGCTATGCTGCTAGTGGTAGCCTATCTGGGTATGATGAATATGTTCCAATGGTTGACAAAGCTGTTGATGCTGTTTGGAAGAAGCAAGC TTCACTCCAGAGGTCTCATACTTCAAAAGGTTAACAACTGTAGCCTAGCATTTATAGTAGATATACCCTTATAAGTTTTCTGGTGGTGCCTGTTAACCAA AAAGTAATAGCATACATGTAAAAATAATTCTCTACATTTAAATGGTGTGTACTTTCTGTGGCATGTCTTACTAGAAAGAAACCCATTTCTTTTTTAGCGT AATGGCACCTGTCGCCTAATCTTTTCAGGACATTTTGTTGCTGTAAGCATATTTAATGTTAGGAGATTCAGTATATTATAGTGCTGTGTATAATTTAAAA AAAAAAATAGGTTCAATTATTTCATGAATTCCAGACTGATAAATATATGATTGATATCAAATGATATTTTAATTAGCTGTATAGGGCAGTTAATGCCCTT GTTGGCAGTCAGTTCAGTAGGCACTTCACACTCGCACCACAAATAGCAATGCAATCTCCTCCTCGGATCTAATTTTTTTGACCAACTTTTAAAATAAGAT AGTGGATTTCGGTTCATGGAAATGGTCTATTAGACCCAGTGTGTTGATTAATTTCTTGTTGGTTAGAGACACAAACCATTCTGGGGCCTCCATGCATGTT TTGAGCTGTTGGAAGAATTGATCCTTGACATATTATTTGTGTTTTGTCAACACTTTAAGTGCAAAAGGCTTTTATGTGACGAGTTTGTTAAGGATATAAA TAAGTACTCATACTGGCCATGTTCCTAAAAACTTAACTTATGGGAGGCCTGGTACTTTGCTTGGTTTCTTGATTTTTATTGTTTAATGTAATTTGTTCCG GAAAAACTAAATTTCAATTTCAATTTCAGGAACACCTCCCCTTCTTGACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_181631; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_387573
| Blastp | Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 from Arabidopsis with 82.06% of identity |
|---|---|
| Blastx | Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 from Arabidopsis with 79.95% of identity |
| Eggnog | Transfer protein(ENOG410XRSQ) |
| Kegg | Link to kegg annotations (AT2G21520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413568.1) |
| Pfam | CRAL/TRIO, N-terminal domain (PF03765.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |