Ll_transcript_387774

• Id Trinity: TRINITY_DN50999_c1_g3_i5
• Name Transcript: Ll_transcript_387774
• Sequence: AATATCTCTCCCACACTTCTCTTTTTCCTTAACCCCAATATAAAGTTCCATTATTTCACTCATTCTCCTCTTCACTTTCTTAAGGTTTTCACTTACTCTG TGTTTCTTCTAACAAAACCAAACATGTCAAAGAGAAAATTCGGTTTCGAAGGTTTCGGTATTAACCGTCAATCCACCTTTGATTTCGAACAATCTCAACC TCCTCAACGACTCTACGCCCCTCCCTCCTCCCGTCACGGCGGCGCTCACGACAACCACGAAGACACCGACCTCGACAACATCGATTACGACGACAATAAC GACGGCAACAACAACGACGCTGGTGTTTCTGGCGGTGCTGATGATGGTGAAATTGATCCCTTGGATGCATTCATGGAAGGTATCCACGAGGAGATGAAGG CGGCGCCGCGGCCGAAGGAGAAAGAAAAAGTTGAAGATAGGTTTAAGGATGATGATGAAGAGGATCCAATGGAGAGTTTTTTGAGAGCGAAGAAGGATTT AGGGTTGACGCTTGCTTCGGATGCGCTTCACGCGGGGTATGATTCGGATGAAGAGGTTTATGCTGCTGCTAAAGCTGTGGATGCTGGTTTAGTGGAGTAT GATTCTGATGATAATCCTATTGTTATTGATAAGAACAAAATTGAACCTATACCTGCACTTGATCATAGTTCTATTGATTATGAACCTTTTAGTAAGGATT TTTATGAGGAGACACCTTCAATATCAGGCATGAGCGAGCAAGATGTAAATGAACATAGGAAAAGTTTGGCTATTCGTGTATCGGGTTTTGACGTTCCTAA GTCAGTCAAGACATTTGAGGACTGTGGTTTTTCTACAGAAATTATGAGTGCTATTAAAAAGCAAGGCTATGAGAAGCCAACATCTATACAATGCCAAGCT TTACCAGTTGTGCTTTCTGGTAGAGATATCATCGGTATAGCGAAAACTGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATTGTGCATATCATGG ATCAGCCTGAACTTCAGAAGGAGGAGGGTCCTATAGGAGTGATTTGTGCACCCACTAGAGAATTGGCACATCAGATATTTCTGGAGGCCAAGAAATTTGC GAAGTCATATGGTATACGTGTATCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGATCAAAGAACTCAAGGCGGGCTGTGAGATAGTTGTTGCTACC CCCGGAAGATTGATAGACATGCTAAAATTGAAGGCATTCACAATGACAAGAGCAACTTACCTGGTGCTTGATGAGGCTGATCGGATGTTTGATCTTGGAT TTGAGCCACAAATAAGATCCATTGTTGGTCAGATTAGACCAGATCGCCAAACTTTACTTTTTTCTGCAACAATGCCTCGCAAAGTTGAAAAGTTGGCCAG GGAAATCCTTACTGATCCTATTAGAGTAACAGTTGGGGAGGTGGGAATGGCAAATGAAGATATTACTCAAGTTGTCCATGTAATTCCTTCCGACTCTGAA AAATTGCCATGGCTTTTGGAGAAGCTCCCTGAAATGATTGATCAAGGTGATACCCTAGTATTTGCTTCCAAGAAGGCCACTGTGGATGAAATTGAATCAC AATTGGCTCTGAGAGGTTTTAAAGTTGCTGCCCTTCATGGTGATAAAGATCAAGCTTCTCGTATGGATATTTTACAGAAGTTTAAATCTGGCACATACCA TGTGCTTATTGCAACTGACGTTGCTGCTCGTGGTCTTGACATCAAGTCAATTAAGTCAGTGGTAAACTTTGATATCGCAAAAGATATGGACATGCATGTC CATCGCATTGGACGAACAGGCCGTGCTGGTGACAAGGATGGGGTTGCATACACACTTATAACTCAGAAAGAAGCACGGTTTGCTGGTGAATTGGTTAATA GCTTAATTGCTGCTGGTCAAAATGTTTCTGTGGAGTTGATGGATCTTGCTATGAAGGATGGGAGATTCAGGTCAAAACGTGATGCAGGAAACGGAGGAGG GAAGAAAGGCCGAGGGAGAGGTGGCGGCCGTGGTGGTGGCGGACGAGGTGTGCGTGGAGTGGATTTTGGCTTGGGTATTGGATATAATTCAGAGTCAAAC AATGTTCCATCATCTACCACAGTTCCAAGTCGATCTACTGCCATAAATTCTCTACGGTCAGGAGTTATGTCACAGTTTAGGAGTAACTTCGTTGCTGCTT CATCAAACGCCCCAACTCAAGGATTCACCAATAATGCAACCACTCCTGCCAAGAGACCAGCACTAGCCGGCTTCGTATCCGGTGGATCAATCGGCGGGGA TATAAATACACCACATCAGAGTACTTCTTCATTCAATCCTGCTACACCCGCAGTAAATTCCACTAGTCAAAATTCTAGCCAGAAGAGCACAAACAGTTCC AAGCCTAGAGAAAGGAGAAGGCCATCAGGTTGGGATAGATAGTAATGTCACATTGAATGGTACCATTGTTTAATGTATGAATATTACTATATATTACTAT GTATTCTAAGTCAAGTTTTGATTTGATTTTGTTTGTATTGTTAGTGTTAAATTGTTAATGCTAGTTTCAAATCGCTTATTTTTTTAAGCTTATAAGCTAT GGTTTTAGTCTTTAATTTGCACCATCAAGGAACACAATGAATTTGCATCCTAAGAAGTGTGGTCAATTACTTCAATCAGTGCTATTTGGCTCTGTAAAAA TAAACGTGAACATTATTTTTATTTTTTTCATTAAATAATGATTTTAGTGTCAATCAAAA
• Tissue: pods
• Gene name: LI_gene_181641;
• Additional information: details;

Expression of Ll_transcript_387774

FPKM

• PAB: 1.1
• PNAB: 0.6
• PS1: 0.7
• PS2: 0
• PS3: 0.1
• PW1: 1.1
• PW2: 1.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_387774

• Blastp: DEAD-box ATP-dependent RNA helicase 24 from Arabidopsis with 74.68% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 24 from Arabidopsis with 73.51% of identity
• Eggnog: ATP-dependent RNA helicase(ENOG410XSQV)
• Kegg: Link to kegg annotations (AT2G47330)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419515.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;