Ll_transcript_530099

• Id Trinity: TRINITY_DN51011_c4_g1_i4
• Name Transcript: Ll_transcript_530099
• Sequence: GAAAGTCGTGGATGACATCCACAACTTTCATTGAAAGTCGTGGATCACAAATACGATTTTATGGGGAACTCGTGCATGGGAATCACGAGTTCTCTCTCTT CCATGGAACTCGTAGACCCTATATAAGACTTTCAATAAATAAAAAATCAAACGTCCAAACGGGGTCCAGCTTCTCTCCGGTGAACAATGCTTATTTTGGA TCATCACATGAACTTTCTTTGTAGCACCTCAACTTTGACTAATTTCTTTGGCTATTATTACTTGGTTGAATTCTTATCCCTAACCCCATTTACTCTTCTT ATCACTTCTAACTTCTCCTACTTTCATTCAACTTTTCCATTCCCTCATCTTTGTATTATTTTGAACCATACACACGAAACCAGATCTACACTGAAAATGT GGAACAGCATAGGTTCCTTCGTTGGTGGGAAAGCATTTCAAGCAGTGAACTTGCTCCGTGGTGTCCACAAAGAAGCTGCAGAGATTAATGCAGAACTTGA AGTCATTCAAGACATTATCAATGGTGCTGATAGAATGGTTGCAACAACTGAACGAGAAAACAAAGGTGACAATGGAATGAAAAGAAAGGTGAAGGAGCTG AGAGAAGTAGCTCTTCGAATAGAAGATGTCACTGAAGATTATATGATCATCCAACAACAGCAGCCTCAAGGCGATATTGGATGTATAGCTGTACTTTATG CTACAGCTAACTTCATCAAAACTATGATCCCTCGTCTTCGAATTTGTTATGAGATTCAAGACATCAAAACAAGCATTCGTGAAATTAATGAAAGACCTGG CTTACAAATCCAACCTTTTCTTGAAGGTGAATCAAGCAGTGGAAGCCAAAATGTTCCATCACAACATGTCCTTAGAAGGAACGCTCTTTATGTTGAGGAA GAAGATGTTGTTGGGTTTGAAGGTCCTAAACATGACTTGATTGGCTGGTTGGAAGAGGCACAAACAAAGCGCACTGTGATCATTGTTGTTGGAATGGGAG GGCAAGGAAAAACCACACTTGCCAAGATAGTTTATGACAAGGTGATTGGTGACTTTGATTGCCATGTATGGATCACAGTGTCTCAGACATACAGGATAGA AGGTGTGTTGAAGTCCATGTTGGAGGAGTTTGGGAAAAACAAAAATGAGGTTTCTGAAATGGATCTAGATTCCTTGATCAAAGAGGTGAGGAAGTACTTG CAGCAAAAGAGGTATGTTGTCTTCTTCGATGATGTATGGGACAAAGACTTCTGGAGTAAGATTGAATTAGCTGTGCTTGATGATAAAAACAGAAGTAGGA TATTGATCACAACAAGAGACATGGAAGTTGCAAACTTTTGTAAGAAATCTTCTTTTCATATTCACAACTTGCAACGTTTATCTTCACAGGAATCTATGAA ACTCTTCTTCAAGAAGGCATTCCAAAATGAACCTGATGGCATTTGTCCAACAGGTCTTGAGGAAATATCCTCCAAGATTGTTGGAAAGTGTGAAGGGTTA CCTTTGGCAATTGTTGCCATTGGTAGTCTTATAGCTTGCAATGGAAAAAACTCACTTGAATTGCAAAAGTTGTGTAAGGCTCTGATTTATGAGCTAGACA AGAATCCTAATTCAACTGGTATAACAAATATTCTAGGTCTCAGTTATGATGCTTTGTCTTATCCTCTCAAGTCATGCTTCATGTATTTTGGAATATACCC GGAGGACTACGAAGTTAAACCTAAAAGGCTAATTAGAAAGTGGATAGGTGAGGGGTTTGTTAAATCTGAGGAACTTCATGAAACTTTGGAGGAAGTTGGG GAACAATATTTGAAAGAGTTGATTCAAAGAAGTTTGGTGCAAGTATCTTCCTTTGGTATTAGTGGCAAACCTAAAAAATGTCGTGTGCATGACCTATTAC GTGACATGATCCTTACGAAAATTAAGGATTTAAGTTTTTGTCACTTTGTTGGTGATAATCATTCAATGATTAGTGGGAAGATTTTGCGCTTACAAATAAC ATATGATCCGAATGTTAATTATTTGAAAGATGTCAATATTGAAATGTCATCCATTCGGTCGATTAATGTTTTTGGAGATAAAGAATTGCCTAAAGACTTC GTGGGGATGATCACTACAGAAAGCAAGCGGTTGAAGTTTATTGATTTTGAAGATTGTCCGTCGGAATATATTCCTCAAAATTTAGGGAATTTAATCCACT TGAGGTATTTAAGCTTTAACAATTATAATGAATTGAGTAGTCTTCCAGAATCCATTAGTAATCTGCAGAACCTAGAGACCATTGATATAAGGATGACACG TTTGGAATCACTGCCAAGGGAGATTAACAAGCTTCATAAGCTACATCATCTTCTTACTCATGGTTGGACGAAAATGATGGGAGGTGTTAGAGGGTTGGAA TCCCTACAAACACTATATAGGGTGAACACAAAAGATTGGGGAGAAGAGTTGTTTGAAGATCTTAAAGAGTTGAAGCAGTTAAGGAAGCTGGGCTTAAGGA ATGTTAATCCGAAATATGCATGCAATTTATGTTACTCAATAAATAATATGCAACACCTTCAGAAGCTATACATTGGTATAGGAAGTAAAGGTTTCATTGA TTTGGATTGTATGTCACCTCGGCCTACACTTCAGCGTCTTAAACTAGTAGGGAAGTTAGAGAGGTTTGAAAAGTGGATTCCAAAGCACCAAAATCTTGTT AAGTTGTCATTGACATACTCCAAATTAAGTGATGATCCAATGAAATCACTCATGCATCTGCCAAACTTGTTGTCCTTGTATCTCTGGGGTGCATATGAAG GTAAAACTTTGCATTTCCAAAATGGGACGTTTCAGAAACTTAAGAAACTAGAGCTCGCATACTTGCTTCGTTTGAATTCCATCCACATAGGTGAAGGAGC ACTGTCATCTCTGAAACAGTTGGAGTTAACGTTCATCCATGGACTCAAGGAGGTTCCCTATGGTATGGATCAATTAGGCAAGCTTCAAGTTTTGCACATT GACAGAATGCCACAAGAATTTGGTGATAACATACGGCAAAATGTATGGATCCAGAACAATGTTCGCACAGTAATTATTGAAGGTGTTGGAGACTTATTGC TGCTTCTGCAATAGTCTACTTGCAGAGAAGAAAAATGTTGAGTTGTTGAAAATGGAAGGAAACAGGAAGAGAAGAAGAAGAAGTGTTGTGCCGTGAGGAA GAGAGAAAAAGAAGATGAAACAGATTGAGAAGAAGATTAGAAGGAAGAAGCAATAGAAGAATGTATGCCTTGTGTATTAAGAAACAACAATAGAGTACTT TCTATTATTGGAAACTATCAACTACTTTTCAAATGGACAAAGCTATTTATAGTAAGTTTTAACTAACTACCAACTAACTCACTAAC
• Tissue: pods
• Gene name: LI_gene_181721;
• Additional information: details;

Expression of Ll_transcript_530099

FPKM

• PAB: 1
• PNAB: 2.5
• PS1: 2.7
• PS2: 1.6
• PS3: 1.8
• PW1: 6.9
• PW2: 7.8
• PW3: 6.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_530099

• Blastp: Disease resistance protein RPM1 from Arabidopsis with 29.37% of identity
• Blastx: Disease resistance protein RPM1 from Arabidopsis with 29.37% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT3G07040)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413918.1)
• Pfam: NB-ARC domain (PF00931.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;