Id Trinity | TRINITY_DN51011_c4_g1_i7 |
---|---|
Name Transcript | Ll_transcript_530103 |
Sequence | ACTCTGACATTACTATAAGATCCAAATATCAAAATCATTTTCTTTCTCTTATCCATTGCTCTCTTTTTTCACACTCCAATCTTAATAGACCAACTCTGCC ATGCTTAGTCCATATCTGCTATTACAGCTAAGTTTGTTTCTGCAATGTGACACAACCTAGAAGGTCCAAAAACATTTAAATCTGCTTCAAAGTACAGTGT ATCATGATGCCATCATATTCTCTGGACTTGTATAACGAAAAAGTTAGTGCAGCGGTATACTTTGACCGGAAAATTACACCTTGGTGTATCTTTTCAGTTA TTTACCAAAGTGGTATACTTTTTTGGGAAGTCGTGACTTCAATCCACGACTTCCATGGAAGTTGTGGACCCGAAATGAGATTTTATGGGAAACTCGTGGA CCAGAAATGTGATTTTACGGGGAACTCTCTCTCTTCCATGGAACTCGTCATGAATGCCAAAAGTTTTCTCTCATCCATGAAATTCGTGGACCCTATATAC GACTTTCAATAAATAAAAAATCAAACGTCCAAACGGGGTCCAGCTTCTCTCCGGTGAACAATGCTTATTTTGGATCATCACATGAACTTTCTTTGTAGCA CCTCAACTTTGACTAATTTCTTTGGCTATTATTACTTGGTTGAATTCTTATCCCTAACCCCATTTACTCTTCTTATCACTTCTAACTTCTCCTACTTTCA TTCAACTTTTCCATTCCCTCATCTTTGTATTATTTTGAACCATACACACGAAACCAGATCTACACTGAAAATGTGGAACAGCATAGGTTCCTTCGTTGGT GGGAAAGCATTTCAAGCAGTGAACTTGCTCCGTGGTGTCCACAAAGAAGCTGCAGAGATTAATGCAGAACTTGAAGTCATTCAAGACATTATCAATGGTG CTGATAGAATGGTTGCAACAACTGAACGAGAAAACAAAGGTGACAATGGAATGAAAAGAAAGGTGAAGGAGCTGAGAGAAGTAGCTCTTCGAATAGAAGA TGTCACTGAAGATTATATGATCATCCAACAACAGCAGCCTCAAGGCGATATTGGATGTATAGCTGTACTTTATGCTACAGCTAACTTCATCAAAACTATG ATCCCTCGTCTTCGAATTTGTTATGAGATTCAAGACATCAAAACAAGCATTCGTGAAATTAATGAAAGACCTGGCTTACAAATCCAACCTTTTCTTGAAG GTGAATCAAGCAGTGGAAGACAAAATGCCCCATCACAACATGCCCTTAGAAGGAATGCTCTTTATGTTGAGGAAGAAGATGTTGTTGGGTTTGAAGGTCC TAAACATGAGTTGATTGGTTGGTTGAAAGAGACACAACCAAAACGCACTGTGATCATTGTTGTTGGAATGGGAGGGCAAGGAAAAACCACACTTGTCAAG ACAATTTATGACAAGGTGATTGGAGACTTTGATTGTCATGCATTGATCACAGTGTCTCAGACATACAAGATAGAAGGTGTGTTGAAGTCCATGTTGGAGG AGTTTGGGAAAAACAAAAATGAGGTTTCTGAAATGGATCTAGATTCCTTGATCAAAGAGGTGAGGAAGTACTTGCAGCAAAAGAGGTATGTTGTCTTCTT CGATGATGTATGGGACAAAGACTTCTGGAGTAAGATTGAATTAGCTGTGCTTGATGATAAAAACAGAAGTAGGATATTGATCACAACAAGAGACATGGAA GTTGCAAACTTTTGTAAGAAATCTTCTTTTCATATTCACAACTTGCAACGTTTATCTTCACAGGAATCTATGAAACTCTTCTTCAAGAAGGCATTCCAAA ATGAACCTGATGGCATTTGTCCAACAGGTCTTGAGGAAATATCCTCCAAGATTGTTGGAAAGTGTGAAGGGTTACCTTTGGCAATTGTTGCCATTGGTAG TCTTATAGCTTGCAATGGAAAAAACTCACTTGAATTGCAAAAGTTGTGTAAGGCTCTGATTTATGAGCTAGACAAGAATCCTAATTCAACTGGTATAACA AATATTCTAGGTCTCAGTTATGATGCTTTGTCTTATCCTCTCAAGTCATGCTTCATGTATTTTGGAATATACCCAGAAGACTACCTAGTTGAACCTAACA GGCTAATTAGAAAGTGGATAGCTGAGGGGTTTGTTAAATCTGAGGAACTTCATGAAACTTTGGAGGAAGTTGGGGAACAATATTTGAAAGAGTTGATTCA AAGAAGTATGGTGCAAGTATCTTTCTCTGATATTAGTGGCAAACCTAAAATTTGTCGTGTGCATGACCTATTACGTGACATGATCCTTACGAAAATTAAG GATTTAAGTTTTTGTCACTTTATTGGTGATGATGGTTCAATGATTAGTGGGAAAATTCAACGCTTACAAATAACATATGATCCGAATGTTAATTATTTGA AAGATGTCAATATTGAAATGTCATCCATTCGGTCGATTAATGTTTTTGGAGTTGAAGAATTGCCTAAAGACTTCGTGGGGATGATCCCTGCAAAATGCAG GCGGTTGAAGTTGATTGATTTTGAAGATTGTCGGTCGGAATATATTCCTCAAAATTTAGGGAATTTAATCCACTTGAGGTATTTAAGCTTTAACAATTTT AATGGATTGAGTAGTCTTCCAGAATCCATTAGTAATCTGCAGAACCTAGAGACCATTGATATAAGGATGGGACGTTTGGAATCACTGCCAAGGGAGATTA ACAAGCTTCATAAGCTACGTCATCTTACTTTTTGGTCGACGAAAATGATGGGAGGTGTTAGAGGGTTGGAATCCCTACAAACACTATATAGTGTGAACAC AGAAGAGTGGGGAGAAGAGTTGTTTGAAGATCTTAAAGAGTTGAAGCAGTTAAGGAAGTTGGGCTTAACGAATGTTAATCCGAAATATGCATGCAATTTA TGTTACTCAATAAATAATATGCAACACCTTCAGAAGCTATACATTGGTATAGGAAGTAAAGGTTTCATTGATTTGGATTGTATGTCACCTCGGCCTACAC TTCAGCGTCTTAAACTAGTAGGGAAATAAGAGAGAAAAG BLAST |
Tissue | pods |
Gene name | LI_gene_181721; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_530103
Blastp | Disease resistance protein RPM1 from Arabidopsis with 29.32% of identity |
---|---|
Blastx | Disease resistance protein RPM1 from Arabidopsis with 29.46% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT3G07040) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413918.1) |
Pfam | NB-ARC domain (PF00931.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |