| Id Trinity | TRINITY_DN51015_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_528351 |
| Sequence | TAATGATTGTACTAAACTTGTTAAAGTTCACTATTCTGTTGGACTACACAAGAAGCTTGAGGTTATGATCTTTTGTAGATGCATAAGCCTTGAAAGTTTT CCAAGTAAAATGGAAATGTGTTCTTTGAAGTACCTTACTCTTAATTACTGCTCAAAGCTTAGGAGACTTCCAGATTTTGATGATACAATGGAATGTTTCT CAGAATTATATTTAGAGTATTGTACAAATCTTCTTTCCCTTCCAAACACAATTAGCAATTTGAAGTCTCTAAAAATTCTCGACATATGTGGATGCTCAAA AGTTGATAGGCTTCCAAACAATATAAATGAAAACAAGGCTTTGGAGGATCTTGATATGAACTATACATCTATAAGAGAAATAGATTCATCTTTATTTCAT TTGGAAAATCTCAAAAGGCTTATTTTTGATGGATGCAGCGGGCCAACATTCAAATCTCAAGGCAAACTTTTAACATCTTTGTGGAAGGGTTGGAGGAAAA GGTATCAAATTATTAATACAGAATCCTTAATGTTACCTCGTTTCATCTCCAATCTTTCCTCATTAACTATTTTAGATTTAAGATTTTGTAACCTCAAATC ACTCCCTGAAGATATTGGCCACTTACCATCATTGGAGATATTAGATTTACGTGGGAATGTTGGTCTATCCCTACATTTGGCAAGCATAGCTAATCTTTCT AAGCTTCGTATTCTTTTGTTTGATGGTAATATGTATGGCTCTCGAACTCTGCTTCCAACACATGTGCGCATATATCCACAAGATTTAAGTGCAGATCTTA GTGTAGTAAATGGACCAAAGCTGTGGAATTCGTTCAAGTCATGTTGCAACGAGGAAGAGCATATTGAGGTATGCTTATTAGCATAATGAACTCTTTTTAT ACCTACAATTTTTCATATAATATTGTTTTTGGCATATCATATACTAAACATGTAGTTTGAGAAAAAATATTCATTTCCCTTTCGAGTTTATAAAACACAC AATGTTTTTGGTATGTGCAGGATTGTTCACCATTTCTTTTGTTTTTAACGAGCAGCATGTCTATAAATAAGAACTATCCATCTTACTATATTGATGGGCC AGTTTTGTCAAGACATGATAATTCAAGTGCATACATTGAAACCGATTGTGGTATGGGTATATGGTTCGGACTTGTCTTATTTATTGTTTTAGAGCCTGAG GTGTCTTTATCTATGCCTTTGATGACAAATTCCATCTACATTACATGGTTATTTGACTCTCTCAATGAATATGGTAGAAACTTTGGCTGTATCACATCAA CGACTGCAAATAGTAATCACTACGTGATGACAATCATAATGATCGATGATGTTACATACATTCAACGACATCAAAGTGGTTACCATCACAAGAATGTATC AAATCATTTTATCAAATTTTTGAAAACTGTTGAAAATACTCAGTTAAAAATTAAAGTTGCATTGGAAGGAAGAAAGATACGCAAATGTTGGTTGCAACAG TTAGGTAAGGAAGATTTTAGGTTTGAAAGTTTGACCATACCTTCAACAAATTTGTAGATATTATAAATTTGAATGCACAATTTTCAATAATATGTCACCA TGATATACTACTTGTAACTGGTTTTGATTTTCTTTATTATTTTGATAATTGTTTTATTTAAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_181734; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_528351
| Blastp | TMV resistance protein N from Nicotiana with 31.3% of identity |
|---|---|
| Blastx | TMV resistance protein N from Nicotiana with 31.82% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441909.1) |
| Pfam | Leucine rich repeats (6 copies) (PF13306.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |