Ll_transcript_530266

• Id Trinity: TRINITY_DN51018_c5_g3_i1
• Name Transcript: Ll_transcript_530266
• Sequence: AATAAAACCGAGTTCAAAAACTTAACTAAAACCAAAGTAAAGAGATTCAAAGCACTTGTAAAAATACTTTTCAAATAAAGTGCGTGTACAGAATAAAAAC ACACAACTAATCACGATCTCAACACTTTCAACACTTATCTTGGGGGAAGAGGAGGAATATGAAGGAGAGAATGAGGAGGAACCAAGACCAGAAGAGGCAG ATGCTTTACAATTGTCTCTATATTCTATGAAGGGATTGACTTCTAACAGATCATGGAAGCTAAGAGGTGTGTTGAATGACAAACCGATGGTGGTGTTGAT AGATTGTGGAGCATCCCACAATTTCATTGCTAAAGATTTAGTGCAGAAGCTTCAACTGACAGTGGAGGGAACTAAATCCTATGTTTTTGAGGTGGGTGAT GGACACCAAGTCAAATGCAGTGGGAAATGTTCTAATCTGAGAATCCTCCTACAAGATTCAGAAGTCATTCAAGACTTTTATGTCTTTGGTCTAAGGGGAA TGGACCTAGTGTTGGGTATTGGATGGTTGGTTGGGTTAGGTGAAGTCAGAGCTGACTTTGGTAGACTGGTTCTGAACATGAAGAAGGAGGACTCAATAAT CACACCTAAAGGAGATCCATCATTGACTAGGACAAAATTATCTGTTGGGGCTCTCATGCAAGTGTTAAGGGAAGAAGGGGAGGGATTACTGATTCAATAT GATGAACCTAATCCACAAGCTGCTGGACTCTCCATCCCTATTGAAATACAAGACCTGCTTTCACAGTATGAAGGAGTTTTTCAGAACCCTCAAGGCTTAC CACCACCTAGAAGTCATGATCATGCAATCCATTTGAAAGAGGGAGCAAATATACCTAACATCAAACCCTACAGGTGTCCATATTATCAGAAAGCTGAGAT TGAAAGGCTGGTTGCAGAAATGCTAGGGGCAGGGGTGATAAGGCATAACGTAAGTCCTTATTCTAGCCCTATAATATTGGTCAAGATGAAGGATGGTGGG TGGAGGTTCTGTGTAGACTACAGAATCCTTAACAAAATCACCATAACAAATAAATTTCCTATTCCCCTAGTGGATGAGTTGCTAGATGAAATTGGAACTG CTAAGGTCTTCTCCAAACTAGACCTAAAATCAGGGTACCATCAAATAAGGATGAGGGATGAGGATGTTGAGAAGACAACTTTCAGAACTCATGAGGGTCA CTATGAGTTCCTAGTGATGCTATTTGGGCTCACTAATGCTCCTTCAACATTTCAAGCATTGATGAATGAGATTCTTAGGCCCTACTTAAGGAGATTTGCA CTAGTATTCTTTGATGATATACTAGTCTTCAGTCCTGATTTGGTCGCTCATGTCCAACACCTAGATTCAGTTCTGCAGCTACTTGAAAAACACTCACTGA AGGCCAACAAAAAGAAGTGCAGCTTTGGCCAATCCAGCATTGAATATCTTGATCATATAATCTCTGAGAAAGGTGTTTCTGTAGATCTGTCCAAGGTTGA AGATATGGAGAATTGGCCTCAACCAATTAACTTGAAGAGACTCAGAGGATTCCTAGGGTTGACTGGGTATTATAGGAAGTTTGTTAGAGACTATGGCAAG ATTGCAAAGCCACTCACTAACTTGCTCAAGAAGGATTCTTTCATATGGTCAGAGGAGTCTACATTGGCTTTTGAGAAATTGAAGAGTGCAATGGTAGATC TGCCCTTATTAGCAGTCCCTGATTTCACCAAGGATTTTATAGTTGAAACCGATGCATCAAGTAAGGGTTTAGGGGCAGTTTTGATGCAAGAAGGGAGGCC ACTAGCATATTGGAGTCAAGGGTTATCTCCTAGAGCCCAACAGAGGTCAGTTTATGAAAGAGAACTCATGGCTCTAGTGCAAGCCATTCAAAGGTGGACG CATTACTTGATGGGAAGGCACTTCATCATCAGAACAAACTAGAAAAGTCTCGGATTTTTGACTGATCAAAGATTGTTCTCTGGTGAGCAGTTCAAATGGG CAGTAAAGCTTGTTGGGTTGGATTTTGAAATTCAATACAAATCAGGGAGGGAGAACACAATGGCTGATGCTCTATCCAGAAAGATGACATATTCTGCCCT TTCTGTCCTATCTAGTGATGAAGTAGATACTTGGATGGAAGAACTACAACATAACCCAATATGGAGAACAATTATCCAGGATTTGGTCGTTTCTCCCCAT GCCCACCCTAACAATGAGTTGAGGAAGGGTCTACTATACTACAAGGGAAGACTAGTGCTAGCTAAAGACTCTAACAGAATATACCAATTCTCATAACATA ATGCCATGAGACTGCCATGGGAGGACATTCAGGTCACTTCAGGACTTACAAGAAGATCTCTAGTTTTCTATACTGGGAAGGAATGAAGGCAGATATCAAG GGGTATGTGGAAGCTTGTGAAGTTTGCCAAAGAAGCAAGTATTCTACCTTGGCTCCAGCAGGGTTATTGCAACCTCTGCCCATACCACAACAGGTTTGGA CGGATGTATCTATGGATTTCATTGGGGGGTTACCTAAGATAAGGGGTAAGGATACCATTTTGGTGGTGGTAGACAGATTGACTAAAAGTGTGCACTTATC TGCTTTGGGCCACCCCTACTCAGCTAAGGATGTGGCCTCTGTTTTCATCAAAAATGTGGTTAGACTCCATGGTTTCCCCTCTGTTTTCATTTCTGATAGA GATCCATTATTCCTTAGTCAGTTTTGGAAGGAGGTGTTTAAGATGGCTGGAACTCAGTTGAAATTCAGTACTTCATACCATCCACAAACTGATGGACAAA CTGAAATGGCAAACAGGTGTTTAGAGACCTATTTGAGATGCTTTGTGGGACCTAGGCCTAAACAGTGGCTGGATTGGCTTCTTTGGGCAGAGTTTTTGTT TAACACCAACTATAGTACCCTCATCAGGGATGACACCCTTCAGGGCATTGTATGGGAGAGAGGCCCCTACTCTTCTGAAAGCAGGGGCTATTCCCTTCTA GAGTGGAAGAGGTGAAAGCATTATATACGCAGAGAGATGCAGTCTTGGAAGAGTTAAAGCACAATTTGCTAAAAGCTCAAAACTTAATGAAGCAGAATGC TAATAAACACAGAAGACAAGTGGAATTTTCAGAAGGGGATTGGGTTTATTTGAAGTTGCAGCCATATAAGCTCAGAACCATTACTAACAGACCCTTTGCC AAGTTAGCTCCTAAAAACTATGGACCTTATCAAGTGGTGGAAAGGGTGGGAACAGTGGCATACAGGTTAGCTTTACCTTCTCAAGCAAAGGTCCACCCAG TATTTCCATGTTTCCCTTCTTAAAAAAGCCCTCAAACCTCATCAAGTGTCTCAACCACTACCTCCAATGCTTAATGAAGAGTTGGAATTAGAAGTCATTG CAGAAGATATCATGGAGAGCAGAGAAGATGGTCAAGGAAATTTAGAAGTGTTAGTCAAATGGAAGGATCTCCCTAACCATGATTCTAATTGGGAAACAAC AGCAACACTAACTGACAAATTTCCTTCCTTTCCACTTGAGGACAAGTTGGTACTTGTAGAGGAGGGTATTGATAAGATAGGATATAAGAAACCTATCATT AAAAATGTGTATAAGAGAGGGAAAAGAGGTGTTTGGATAAAAGGGTAACAGAATCACTGTTGTGATTCTGTTATATCCCTGGAATTCTGTTAGCATTTAG TTGTTAGGCCTTTAAATAGACCTTTTGGGGGGGGGGGAATATTAGTTTGTTAGTTAATTCTTGGGTTAATACTGATTGTGGAGTAAGTGGCGAGGATCGT GGGATCCATTGTACTTTCTTCTTCATTGTAATTCTTTCTTCTATCTTAATAAAACAATTAGAACCCTAGCAGAATTATACCCATTCTGGTTTAGGGGCAT TTCTTTTCTACTTTCTTGAGTTTTATCTTCTTACCATTGATACCAGTGTTATCAGAAATATTGATAAGAATTTCTATCTATTCGCTACAATGTCCGTCAT GGAGTTATTCTTTTATCTTGCCCATTACACTTCTTTTATCCCGCATTTGAGAGAATCGACTAAAATTAGCCAT
• Tissue: pods
• Gene name: LI_gene_181762;
• Additional information: details;

Expression of Ll_transcript_530266

FPKM

• PAB: 0.1
• PNAB: 2.7
• PS1: 1.6
• PS2: 2.3
• PS3: 2.1
• PW1: 1.3
• PW2: 2.2
• PW3: 2.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_530266

• Blastp: Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 43.95% of identity
• Blastx: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 33.45% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416449.1)
• Pfam: Aspartyl protease (PF13650.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;