Id Trinity | TRINITY_DN51021_c0_g1_i37 |
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Name Transcript | Ll_transcript_530319 |
Sequence | ATCTTCAACCCTTATCCCTTTTCTATTTTACTATTATCATCTTCTCTTTCTTCATCACATTTCACATTTCAATTTCCCTTTTCTCCATTTTCATTTTTCA TTTCTAATCTGAATTTTTCTCTCTTTCTAGTCTCATGGCTTCAAATCCCCCAAAGGACTCACCTGCTGATGACAAAGTCGGCACTGGTGAGAATAAAAAT GCCAAGGCTGAAACATCCTCTGCAACTGCTACTGGTTTCCCACCCAATCCTTTTGATTTCTCAGCAATGTCTGGTCTTCTCAATGACCCAAGTATCAAGG AATTGGCTGAACAGATTGCAAAAGATCCTTCATTCAACCAGATGGCTGAACAGCTTCAGAAAACTTTTCAAGGTGCAACACCAGACAGTATCCCTAACTT TGATAATCAGCAATATTTGCAAACCATGCAACAGGTTATGCAGAATCCCAATTTTATGACCATGGCCGAGCGCCTTGGTAATGCATTGGTGCAGGATCCA TCTATGTCTGCCATGCTTGAAAGTTTTACCAATCCATCAAATAAAGAGCAGATTGAAGAGAGAATGGCACGCATCAAGGAAGATCCATCATTGAAACATA TTTTAGAAGAGATAGAGACCGGCGGTCCTTCTGCCATGATGAGATACTGGAATGATGAGGAGGTTTTGGGGAAGTTAGGACAAGCCATGGGCCTCGCAAA TGCTGGTGATGCAGCTGCTTCTGTTGAAAATTCTGTGCCAGATGAAACTGATGATGCAGGAAATGAAGATGAATCAATTGTTCATCACACTGCTAGTACT GGTGATATAGAGGTATGCCATATCACTTTTTGTGCAGATGCGTATGCTTTTAAAGCTTTCTTCCTTTTGAGGAATTTAAGTTATGGTTGAAGTTATTGAC ATGAAACAGAGGAAGTGGAAAATTATTATCTTTTCACAGGGAACTTGTTTAGTTAGAAGGTACAGATCTGAAACATGTGAATTAAGTTTAGTCATAGTGG ATTTGATGAAATAAAACCAGGCTTAGTGTATTGGTTTGTCTAACAATTGAAATTGGAAATCTTGGAGTCTGACTTAATTGTCTAAATAATCCAACAACAA AGGTTATGCCAAGTGGAGTTACAGCCAAGTAAACAATTTTTCCAACTAGCCTTTCTGTGTTTAGCTAGGTTGCTATTTATCAAACAATTCAGCTTCATCT TTCAGAAACTTCCCATTGGGATCCTTTGGAGTCTACTGGTGTAGCTTAAGCTTCTAGAGTACGGTAAAATCCTTAATTTGATCAGGCCACTTTTTTACCC CAAAATTATCTGATATAGCAGGTCCTTGATAGAATTAGGAAATGTTGCTCGTGTTAAATTTTCAGAGGGCCATTGGGTAGGAGAATACTCGTTTAGAGAT GCTTCCTTGTATCTCTGTTTTCCTTCTTCCATATAACTCTCCTGTCTGTTCAAGGTTCAAATCTCTCTCAGAATTTCCGTTTCTTTGTTAATTTATATGA TAGTGAATTCTCTGAACTGGAGTCTGTTTTGGGCCTTGTTAATTGTGTCCATTTAATTTCTATAATTAAGACCCCAACTAGTGAGATTAAGGCATGGTTG TTGTATTTGTTTTCTGTAATTCGGGAAAAAGCATTTGGCTCTTTCTTGTCATGTTTTTTTTTGTGGTACTTGTTTAAAATCTGAGGTGTTCTCATTATGA CAGTAACCATAAAAAGTAGAGAAAGGCATCACAAAATCAGAAAATTCTTAAGTTTTTTATTGAACATGAATCCTTGGATGATTTCATTTATGATTGAAGG TTACACTATAAAGGCGGTTGCAATCATATGAAACTAATGAAAGGCCACCCTCATAACTCAGCCATTGATGCTGAATGCTAACCTGCAACTTATGACACCA CTTATTACATAGTTTTAATGATGGTAACTCCTAAAAATGACAATCCAAGTGATCAGCTGATGAACTCACTTGGTCTTCAGGTTTTGGGACCTTAGACCAT TATTATGTAGGTTTAGCAAATAGAATATGAATAGATTCTTGGATATTCCCATGCAAACTGGATGAAACATGGTCATGCCATGCCTCGGTCCACAATCGTG TTTCGTGGCCTGGATTCACGCCATGCTCGTGGTGCGTTCATAGCCATGGTTAGCCAAGTCCCTCCTTCTTCAACGCAATGCACCATCCTCGGTGGTTGCT CACTTGCTCCTCTTCCCTTTGGCTGGTTTTCATTAGGGCTTCTACAACCTATCGAAGGGCTTCCTTTTTCCGCTTGGTCCTTGCCCTGGGTAGTGGTCCC CCTAGGCCTTGAAGCTCTTGTTTCAGCTTGTCCTTTTCCATGCCCAAATCAACATGATTATGTTTACTTAATTGATCTACAGATAAATTTAGTAGCTTTC CTCAAACTATGTTTTCTCTCTGTAATTTTATTTTCCCATTTTCGCTGAGATCCCTCATTCTTTAAACTCCTGCTTTTCTTCTTTCCTAGCTCCCTTTAAT CCATTTATTCTGTATTGAAAAAGGAAATTAAGTTCTCATTTAAGATTTTGGAGTGGAAGAAGCTAAGTACAAGCATTGGAAAGCATTCATCGAACCTGAA TGCTTAATACCTTTCGGTTAGTGACACAAATGAAGAATCACTTTTCGAACTATAGTGGTATTTTATGCCCTGTACAAGGGGTTGTATACTTAATTTTTAT TTTAATAATATTTTCAAGGAATAGAAAATTAAAATAGGGTGGACATTCATTCATTTCTGAATTGTTGGTTTGATTGTTAACCTTCATGCATGTAGTTATG CTGTTGTTAAATTCAGCCATTGTCACTTTGTTTCTGGATATGATCTTAGAAAATATTTGAGGGCTAAGACTCCACATCTTTCAATTAGGGTTTGAAAAGT GCACTAGCTGCTGGTGCTGACAAGGATGAAGAAGATTCAGAGGGAAGAACTGCTTTGCATTTTTCCTGTGGATATGGAGAGGTGAAGTGTGCACAAATTC TGATTGAGGCTGGGGCAAAAGTGGATGCTTTGGATAATAACAAGAACACAGCTCTTCATTATGCTGCTGGTTATGGCAGGAAGGAATGTGTGGCCCTTCT CCTTGAAAATGGTGCTGCAGTGTAAGTACCCATTTCGGGTTATACTTTGAAATTGTTATCCTATTCATCATGCAAATGCTTCCTAACCCTTGACAGTCTG TTTTTGTTGTTCGGAAGTAAGTCTTACATCGTCTGCCTCATTCTTCTAACCATGGTTTATACCTATTGGGTTACTCGTCTCATTTTTAATTGATTTTGAG ATAAAACCTTAACTCTTAATTGAATTTAAACTATCTGTTTCGCTTTTTGTTCGATTTCAGTACTTTGCAGAATTTGGATGGGAAAACTCCTATTGATGTT GCTAAGCTAAACAATCAACATGAAGTCCTAAAGCTGCTTGAGAAAGATGCTTTCCTGTAGTTTCCAAATCATGATGGCATGGTGTCAACAAGAAGAATAT TTGGTTTATTGAAATAAATTCTTTTTTTTCTGAATTGGATATTGTAATCCCTCAAACTATGTAACATAATATATGGGTTGTTTTACAATCATGGTATTGT TTCATTGCAAATTTTTTTGGTTGTAGTTTGATAAAGAAAAGGGTAAAGAAAACTTGGCCCACCTTTGAAAGATTTTGATTTAGTGGACTAATTAAAAGTT AAAGGTTTTTTTTGGACTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_181784; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_530319
Blastp | Ankyrin repeat domain-containing protein 2B from Arabidopsis with 57.64% of identity |
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Blastx | Ankyrin repeat domain-containing protein 2B from Arabidopsis with 57.64% of identity |
Eggnog | Ankyrin Repeat(COG0666) |
Kegg | Link to kegg annotations (AT2G17390) |
CantataDB | Link to cantataDB annotations (CNT0000133) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440909.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |