Id Trinity | TRINITY_DN51025_c0_g1_i15 |
---|---|
Name Transcript | Ll_transcript_529213 |
Sequence | ATTCATTCCTCTCCACGTGTCACCGCCATAGCCAATATATACAGAAAAAAGAAAAAGCGATTTAAAAATAACCCAAACCACACTCTTTAACCATGGTTAA TTTCTAACCACACCAACTTCATCATAAAAATTCTATCCTCTCTCTCCTCTTACTATATCTCAGATCTAACATCACCAGCACCACCTCTTCAGAAAACGAC GTCGTTTCATCGTTGAAATCGCAACCATGCAGAAAATGGCGTATTCGTTCCCAGAGGAAGTTCTAGAGCACGTGTTCTCCTTCATCCACTGCAACAAGGA TCGAAGCTCAATCTCCACGGTGTGCAAATCATGGTACGAAATCGAACGGTGGTGCAGGAAGAACGTTTTCATCGGTAACTGCTACTCCGTGAGTCCTACG GTGGTGATTAACCGCTTCCCGGAGGTTAGATCCATAGAGCTGAAAGGGAAACCGCATTTCGCGGATTTCAATTTGGTACCTGAGGGTTGGGGCGGTTATG TTTGTCCTTGGATCGAAGCTATGGCGTGTGGTTACCCTTGGCTTGAAGAGATCAAGCTTAAGAGGATGGTTGTAACGGATGAGAGCTTGGAACTTATTGC GAAATCGTTTAAGAATTTCAAGGCTTTGGTTCTCACTTCGTGTGAGGGTTTCACTAATGTTGGACTTGCTGCAATTGCTGCTAATTGCAGGTCATTTTTT GATTTCGTGCACTGAGTCGCCCAGTTATAAAATGGTTTTTGTTTGTTACTATATTAGGTTTTTACTAGCTTAATATGGTTAGATTTGGTATAACTATTTA TCTTTTGATAAATTAATGGTCTAATGAAATGTGATACTGGCGATTGGTTTGTTTTTGTGTTTTATTTTGTTGTGGTGATAATGATGGTGAAACCGTGAAA TGAAGCTAAGAAAATGTGCTTTCATGTTTTCTTTCACATAGAAAGTAAAATAAGTGAAAAAGATGGTTTTTTTAAATGTTACTGAAATTATATTACAAAT TTGAAATCAAAACAAGAAAAGTCCAACGTTAATAAATATTTTTTCCGTATTATTTCCTTTATTTTGGGCTTTAATTTTGGTGGAAGGATTTAAAATTGAA GTTGTATTATGTGGTATACTTTATTTGTGAGTTATTCTGGGTAGTGGATTCGACAGACTTGCTGTTATGTTCAGCTAATTTTTTCCAGGTCTATGGTACT GGATCAAAGGGACTAACCACTTACCAATGGATTGTGGTTATGCTTCGGAGTTTAGATATCTTCTTTCTTACTAAATCAAGCATTATTGGCCACCTTTTGA TGTGTATGTATGTTTTTCATTATTTAATAAAATAAAAAAAATTGACACTTCAATACCTTGAAACATACTACTAAATCCTTTGATTATTTGTCTTGGTTGT TTATGATTTGATTTTAGGGGGTTAGATGTATATTTGGCAATGTTTTGGTTGTTGAAATAATGGAGTGTTCTTAATATTTCTTGTCTGATTTCACTCTGAG CTCCATTTCTATTTTCCTCCTATTCATCATGGGAAACTTGCATGAATGATGTTGACTTTGGCTTGGTGTCGTTCAATTTACTGTATTCTATATTTAGTAA AATAAATCTTGAGGATCCCTATGTCTGAACTGAAGTGTCTTATAACTGTTATTGATAAATCCACTGTCTGTGAATACACTGTAGGGGTTTGAGGATGTTG GACTTGCATGAGAGTGGAGACGAGGACCTCAATGGGAATTGGCTAAGCCATTTTCCTGATTCATACAAGTCATTAGTGTCACTTAACATCTCTTGCTTAG GCAATGAGGTGAGTTTGCCTGCACTAGAGCGCCTCCTTGCTAGGTGTCCCAATCTGCAGACCCTCCGACTGAATCGCGCGGTGCCCCTTGATAGGCTAGC TAACCTACTTCGTCGGTGTCCTCAGCTGGTAGAATTAGGTACAGGAGTCTACTCCACTGAGATGCGTCCAGAGGTTTTTGCAAACCTAACTGAAGCATTT TCTGGGTGCCGGCAATTGAAGTGCTTGTCTGGCTTTTGGGATGTGCTCCCAACCTATCTTGCAGCTGTTTATCCTATCTGCTCCAGGATAACATCATTAA ACTTGAGTTATGCTATCCTGCAAAGCTCTGATCTTATCAAGCTTGTCAGTCAATGCCCTAGTTTGACGCGATTATGGGTACTAGATTATATAGAAGATGC TGGCCTTGATGCTCTTGCTGCCTCGTGCAAGGATCTAAACGAGTTGAGGGTGTTTCCATCTGACCCATTTGGGTTAGAACCAAATGTTGCATTGACAGAA CAAGGCCTTGTTTCCGTGTCTGAAGGCTGCCCAAAGCTCCAGTCTGTTCTATACTTTTGCCGTCAAATGTCTAATGCAGCTCTACATACAATTGCCCGGA ACAGGCCTAATATGACTCGTTTTCGCCTATGTATTATTGAGCCTCGAACTCCAGATTATCTTACCCTTCAACCTCTGGATTCTGGTTTTGGGGCTATTGT AGAGCATTGCAAGGATCTTCAGCGCCTATCGCTTTCTGGTCTACTTACTGATCGTGTTTTCGAGTACATTGGGACTTATGCGAAGAAGCTGGAGATGCTA TCTGTGGCTTTTGCTGGAGAAAGTGATTTGGGGCTCCATCATGTGCTGTCTGGTTGTGACAATCTTCGGAAGCTGGAGATCAGGGACTGTCCCTTTGGTG ATAAGGCCCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTCCGTGAGTTATGGAGCATGCAAGCTGCTGGGTCA GAAAATGCCAAGACTTAATGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCAGACACTTGTCCCGTTGAGAAGCTTTATATATACAGGACT ATTGCCGGGCCAAGATCGGACATGCCTGGTTTTGTCTGGACAATGAAAGATGATTCTTCACCAAGGCTTGAGTGATCACCTTCTGATTTAGCGACAAAAT TTATCAGCATTTTGATGTGGGAAATTGTTATTGGCAGGTGCATGCTCAGGTTACTATCAGCATTCTGTGGTTGCACTCATGGTTCGTGTTTGAGCTACGC AAAGGAGTGTGTACACACAACCGAAACAAGGCTTGAGCTTCGCCATTCTTTTACTCTTTGGCGGAGCATACCTATTTACGGATTAATAAAGAAACTGAAA CTATGTTGTTGTGTGTTTCTCAGATACTAATACACAGCTACTACAACTGTTCTATTATTTTTCATACTAAAATATTTGCTGACTTAAATTTAATTGCATA TTACCTTTGTCTCCTGTACCTCTATCTTGGACACATTTGTCATTGTTAACCTTCTCAGTGAATATTTCATATTGTAATGCAACTATGATGCATTTATGTC ATTGTACCTGGCTTTCTGTATTTTATTCAAGTATAGTCTTGGAGCTGATTTAACAATTAAGATGAGCCATCAATTCCCAATGCGTGTGAACCCAATAATG ATTCTCATGTTGAAAAGGGTTTTGACATTCAATGAAATAGTTTTGG BLAST |
Tissue | pods |
Gene name | LI_gene_181806; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_529213
Blastp | Protein TRANSPORT INHIBITOR RESPONSE 1 from Arabidopsis with 78.07% of identity |
---|---|
Blastx | Protein TRANSPORT INHIBITOR RESPONSE 1 from Arabidopsis with 77.67% of identity |
Eggnog | F-box and leucine-rich repeat protein(ENOG410XQ54) |
Kegg | Link to kegg annotations (AT3G62980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421520.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |