Id Trinity | TRINITY_DN51033_c0_g1_i3 |
---|---|
Name Transcript | Ll_transcript_528490 |
Sequence | GTACAATCTTTAGAAATTAAAATGGAACGGAAGAACATTTGGAATAGTGAGACTAATAACGATAATCTACACTCATGACAGAAGAGACAGACATCCCATC AAGTAATTGTTGGTGACCTGCTATGGTAAATAGTAATAATCTTTTTTGTTTCCCATTTTCCGGAGGAAATACTGTTCGACCTGAGAACATCTACGTATAC TTGTAACATTTCAGCGAATATTTTTTACATACATAAGACTCGAACCGTTAAATGGTAATGATTTGAGCTGGAGTATTGTTAATTATGATTATACTTATTT TGGAGTCATAAAAGTGAAAACTACAAACCCTCTTTTTCCACTTTTCATTTGATCAATTTCTCCATTCTGTTCCTGAAACCTCCTTAGGTCATGGAACAAC ATTCTCTTCCTCCACCGTCTCAACCACCAACTCGCCGTCTCAAAAGAGGAAGACCTCCAAAACCGAAGCAAAACGATCAAGAGAGTTCTCATGATGCACC AAAAAGGCCTAAATTAAAACGAAGTCGTTTTCAGCAAGGAACTTCAAGTGTTGCTCAACAAGCCTCTGATTTAACATTGATTGGTTTAAATTCAACACTC TATAATCTTCTTATTGCTTAATTATGGTTTAGGACACTGTAACTTCAAATTAATTAACTTCATTTGCAGCTCTTAGCTCTCTTGTTTTACACATTACTCA TTTTCGTTATGCTAGTTGGTATAGTAGTTTGTGAATGAATTGCTCGTAAGTTTCGCGCGTTTTTTCGTTAAAAAAGTCTAATAATAAATGATAGTTAAAC CCAGTGTTATTCTATTTCCTTTTGAGTGTGTCTGGGTGGAGGGTTTTCGGGGAAAGAAAATGGGATTTATCTGGCTGAGCTTATTTGGTGTTGCGATTCT TCAATGTGTTTACGCTCCTTTATCGCATAGTGGCTCTAGTGGGGATATACCTGCGAAAGATACCCCAGGACTCGAGTCAGAGTGAGTAACAAGATAGGAG GCTAGGTAGTCAATAAGATAATCACGGATAGCGGTTGAGAAATTATGATGAACAGAGTGAGGGGAAGAAGCAAGGAGAAGTGGGTGTGCTAGAAAGCGGA GAACATGGCCAGAAATCACCACCAGTAATCACAGAATGCAGAGCTTGTTTTGGTTCAGTGAGGGAAACAATCTTTTAATTGGACATGGGTTTTAGCATTT TAAGAATAAGGGAGAGAAGGGGCGGGTGAAATTACCAAATACACAAAAGAAACTTTTGCCGCGTATTAAAAAACAAGGAAAAAACAGGATTTTCTCATTT AAAAATAAGGGCAAAATTGACTTTCGCCCTTTTAAAAATTATGGCTCTATTTTCAGAAGGTGGACCGAATGGTACACCCGTGACCGGGTATCGATTTTCG CTACTAATAGGTGCGTCAGCCATGCGCTCCACAATTTGCTGTCCCATCGCATGGAGGAGCCGGGAACCACCTCTCCTCCGCTAGCCCATCACAATTGTGC ACAATTTACTACTTAGAGAGGAGGTTGGCCATGAAAGATGATTTACCTAGGCCGTGGACTGGGATATTTATAGCAGACAGAGAGAATAGAGTTCTACTTG TTGGATAAGGAGTGAGTGTTTAGTATGGTGTGCCTGTTTGTTATCTCTTTGGTAGGGTGAGAATCTCAGCCATAGTGCCGCAAACATGGCCAGGGCCATA TTGGAATCCTGGTTGGGCTCTTCTGTGTCGTACTGGGCCAAGATGACTGTGGTTGGGCCAGAATTGGAATATTTATATTTATTTCTCACTTAAGTTAATT TTAAAATGTTTATAAGTAAATAAAAGGAGCCTTCCAAGGTTATACATTACTTTTTTATTTTATTCCTTCATTTTGCAAACACCTCAAATATAGTGTTTAT GACTATGCTTACTCAATAAGGAAAAAACCCTCTCTTTCATTTCCCTTGAAAACCCCAATGTCCAAACATACCTCTGTAGCATGACTACTTATTCATATAT GGAGGAAATTGGGATAGATGGATGCAATACTGGAATGATTTCTCTTCAGTTATTAGAGGCGATCAAAGGTAATGACAAGCTTATTCCTCATGTCGTCAAA CTTTGGGTTGAACGCTATGAAATGGAGCCAAAACCTGCGATGGATGAACTCTTGACGATGTTATTTCAGGCATGCGGAGCCAAGGATTACAACAAAGGTG ATCTCGTGGATGAGAATGATGTTGATGATGTTGTAGTTGCTCTGGTCAACTACGCTATAACTGTATGCATATCATTTCCCTTCGGGTTGTTTCCTATTTG TCACCCCCTGCTAAAAAATTGCTAATTTCATAGTAGTGAAAATGCTAACGCCAAAACTTCACCCTGCTCTCTC BLAST |
Tissue | pods |
Gene name | LI_gene_181846; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_528490
Blastp | Sister-chromatid cohesion protein 3 from Arabidopsis with 65.22% of identity |
---|---|
Blastx | Sister-chromatid cohesion protein 3 from Arabidopsis with 64.44% of identity |
Eggnog | Stromal antigen(COG5537) |
Kegg | Link to kegg annotations (AT2G47980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444130.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |