Ll_transcript_528498

• Id Trinity: TRINITY_DN51033_c0_g1_i9
• Name Transcript: Ll_transcript_528498
• Sequence: ATAAGAAAAAAAATCCCTTAATTGGGCGGGAGATTTATTAATACTACTTTGTAGCTCTAAAAGTGCAAAACCAAAAAAATCATTTCCCAACTTCTGAAAT CGCTTATTTTTCCGTTGAAGTTGCAGAACCTTTCTTAAGTCATGGAAGAAGAATCACTTCCTCCACCGTCTCAACTATCAACTCGCCGTCCCAAGAGAGG AAGGCCTCCAAAACCCAAGCAAAACGACGTCGTTGTCGAACACCAACACCGTGAGAGTTCGCCGGAAGAATTCAACGAACCACCGCGACCGAAATCGAAA CGAGGTCGTTTTAAGGAAGGAACTTCAACTGCTGCTGATGCTGCTCAAAACGCCTCTGATCTAACATTGATTGAGGTGATCAAAGGCAATGGCAAACTTA TTCCTCATGCTGTCAAACTTTGGGTTGAACGCTATGAAAAGGAACCAAAACCTGCAATGGGTGAACTCTTGACAATGTTGTTTCAGGCATGTGGAGCCAA GGATTACAAATGTGATCTCGTGGACGAGGCTGATGTCGATGATGTTGTAGTTGCTGTGGTCAACTGTGCTAAAAATGGTGAAGTTGACGACTATCATAAT TCCAAGAAGAAGGAGTTTAAAAACTTCAAAGAGAATCTAGAATCATTGTGGGATAATTTGGTTTCTGAATGTCAGCATGGCCCATTGTTTGATCAAGTTT TATTTGACAAGTGCATGGACTATATCATTGCACTGTCATGCACCCCTCCAAGAGTTTACCGTCAAGTTGCTTCATTAATGGGACTTCGGCTTGTCACATC ATACATAACTATTGCTAATATGCTTGGTGCACAAAGAGAGACTACACGTAGACAAATGGATGCTGAAAAAAAGAAAAGAAAAGAGGGACCTCGGGTGGAA TCACTAAATAAAAGGTTTTCAGATACTCATGAGAAAATAACATTGTTGGAGGAGATGATGCGCAAAATATTTACTGGGTTATTTGTGCATCGTTACAGAG ACATTGACCCAAATATCAGAATGTCATGCATTGAATCGCTGGGTGTATGGATCCTGTCATACCCATCACTTTTTCTGCAAGATTTGTACTTGAAATATCT CGGATGGACACTGAATGACAAAAGTGCTGGTGTTAGAAAGACTTCCATAAGTGCACTGCAAAACCTCTATGAGGCAGATGATAATGTACCAACCCTTGGT TTATTTTCTGAAAGATTTTCAGGGCGGATGATTGAACTTGCTGATGACATTGATGTTTCTGTGGCTGTTTGTGCCATAGGGCTTGTTAAACAACTACTAA GACACCAACTTATCCCTGAAGATGACTTGGCTCCTTTGTATGACTTGTTGATTGATGATCCTCCTGAAATCAGGCATGCTATTGGAGCATTAGTGTATGA TCACTTGATTGCTCAAAAATTTAATAGCTCCCAATCAGTACCAAGAGGTGAAACAGACAATTCTTCTGAAATCCATCTTAAGAGGATGTTGCGAATTCTG GAGGAGTTCCCGCAAGATCCAATTTTGAGTATTTATGTTATCGATGATGTCTGGGACTACATGACAGCTATAAAGGATTGGAAATGCATTGTATCCATGC TTCTTGACGAAAACCCATTGATTGAGCTCTCTGACAGTGATGCATCAAACTTGGTGCGACTCTTGTGTGCATCTGTGAAAAAGGCTGTTGGAGAGAGGAT TGTTCCTGCTACTGACAACAGAAAGCAATATCACAACAAAGCCCAAAAAGAAGCATTTGAAAGTAATAAACAGGATATAACTGTTGCCTTGATGAAGAGT TACCCATTACTCTTGCGGAAGTTCATTTCAGATAAAGCAAAAGTGTCATCACTGATTGAGATTGTTTTGTATATGAACCTTGAGCTTTATTCCTTGAAGA GACAGGAGCAGAATTTCAAAAATATCCTCCAGCTCATGAAAGAAGCGTTTTTTAAGCATGGTGACAAAGACCCCCTGAGAGCTTGTGTGAAGGCAATTAA TTTTTGTTGCATAGAAAGTCAAGGGGAGTTGCAAGATCTTGCTCGCAATAAATTAAAGGAACTCGAGGATGAACTTATTGTGAAGCTGAAATCTGCAATT AAAGAAGTAGTGGATGGTGGTGATGAATATTCTCTTCTTGTAAACTCTAAGAGGTTGTATGAACTTCAATTGTCAAGATCTGTGCCTATTAATAACATAT ATGAAGATATTGTCATGGTGCTACGAGGTTTTAGGAATATGGAGGATGAGGTTGTTGGCTTCCTGCTTCTGAACATGTATTTACACCTAGCTTGGGGTCT GCAATCTATTATAAATGAAGAAATTATATCTGAAGCATCCTTAACTTCTCTTCTGTATAAGCGTGATACCTTGTTAGAAGAACTTGATTACTTCTGCAAC TTAGCTACCAACAGCAAAGAAGATGGCAGGCAAGGAAGTGAATTAGCTTGCAGGGTATGCGTCATACTTGCAGAAACATGGTTCTTATTTAGAAAGACAA ATTTCTCCAAGACAAAGTTGGGAAGATTAGGATATGAGCCAAATGAAAACGTGCTTCGGAAATTCTGGGAACTTAGTGAACAACAGCTTAATATTTCAGG TAACCCCAGATAGATATGTTGAAGGTGGAGGTGTAGTGCGAAGATTTACCTTATGTTTCTTAATTAAATTTAAGCAACTTACTATGAAATGTAAAAATTC TTCATGTCTACTCTCTGGGTTGGTCATGGCATTGTAAGTTTACATTGCTTAGTAGCTTTGGAGTTAATAATGCTAAATCTCCCTATTGATGTATCCTTGA ACCTTCACATATCTGTAATCTTTTGTGTTCTCATCTTAAGTCATGATAAAAGTGTGTTTCTATTGTCCATCACTTTTTATGAAGAGGGAGAAGATGAAGA TGTTAATAGAGAGTATTCTGAGGAGACAAATAGAGATACTGTTATGATTGCTGCCGCAAAGCTGGTCGTTAGTGATGTTGTTCCTAAGGAATATCTTGCT TCTGAGATTATTTCTCATTTTGTAATGCATGGGACAAGTGTGGCTGAGATCATAAAGCATCTGATCACAGTTCTGAAGAAAAATGATGATGATTTAGCTG CTATTTTTCTGGAAGCACTTAAAAAGGCATATCATCGGCATGTTGTGGATATATCTGGCAGTGAGAATGATTCCTCGGATGGCAACTCTTTATCAGGGTG TAAAGATCTAGCTGCTCGGCTTTCTGGAATATTTATTGGCGCTGCCCGAATCAAACACAAGTCATCCATTTTAAATATTGTCAGGGATGGTATTGAATAT GCTTTTGTAGATGCTCC
• Tissue: pods
• Gene name: LI_gene_181846;
• Additional information: details;

Expression of Ll_transcript_528498

FPKM

• PAB: 0.8
• PNAB: 4.2
• PS1: 2.7
• PS2: 1.5
• PS3: 3.3
• PW1: 3.1
• PW2: 2.9
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_528498

• Blastp: Sister-chromatid cohesion protein 3 from Arabidopsis with 66.96% of identity
• Blastx: Sister-chromatid cohesion protein 3 from Arabidopsis with 66.96% of identity
• Eggnog: Stromal antigen(COG5537)
• Kegg: Link to kegg annotations (AT2G47980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425715.1)
• Pfam: STAG domain (PF08514.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;