Id Trinity | TRINITY_DN51045_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_529192 |
Sequence | GAAAAAACAAAAACAAAAACCCAAAACCTTGGTCCTTAAACGGTTAAACCCTACCTTCCTCCCCATTGAAGAAAAACCTAAATATTCCTGTTGTATTATC ATCATCATCATCAGTGACGCACTTGAACAATGGAACCTCTTCGATTGAAAGCCAATTACCGTTGTGTCCCTTCTCTCCAGCAGTTTTACACCGGCGGCCC CTACGCCGTCTCATCCGACGGCTCCTTCATCGCCTCCGCCTGTGCCGACTCCATCAAGATCGTCGATTCTGCCAACTCATCAATCAGATCTACTCTCGAT GGCGATTCTGAATCAGTAACTGCTTTGGCTCTATCTCCAGATGATAAACTTCTCTTCTCTTCTAGCCATAGTCGTCAAATTAGAGTTTGGGATTTGTCTA CACTCAAGTGCGTTCGTTCTTGGAAGGGTCATGATGGTCCGGTTATGTCCATGGCGTGCCACCCTTCTGGAGGATTGCTTGCTACTGGTGGAGCTGATAG GAAGGTCCTTGTTTGGGACGTGGATGGTGGCTTCTGCACTCATTTCTTTAAAGGTCATGGTGGCGTTGTTTCTTGTGTTATGTTCCATCCTGATCCAAAG AAACAACTTCTTTTTTCTGGCAGTGATGATGGTGGTGATAATGCAACCATAAGGGTTTGGGATGTTTCCAAGACCAAGAAAAAGAACTGCATTGCAACTC TAGATAATCATCGTTCAGCAGTGACTTCTATAGCAGTATCTGAGGATGGATGGACATTGCTTAGTGCTGGAAGAGACAAGGTTGTAACATTGTGGGACCT TCATGATTATAGCAATAAGAAGACTGTGATAACAAATGAGGCAGTTGAAGCTGTTTGTGTGATTGGTGCAGGGAGTCCTTTTGCTTCATCTCTGGATTCA TATCGGCAACAAGCAAAAAAACTAGCTGGTTCCAAATCATTCTATTTTGTTACAGTTGGTGAACGAGGCATTGTGCGTATATGGAGTTCTGAAAGTTCAG TTTGCATGTTTGAGCAAGAGGCTTCAGATGTTACAGCTAACATAGATGAGGAGGGCTCACGAAGGGGTTTTACATCTGCTGTCACGATTGCCTCAGATCA AGGGTTGATTTGTGTGACTGCAGATCAGCAGTTTCTGTTTTACTCTCTGGATTTAACTGAAGAGTTGTTGAAGTTAAATCTCACAAAAAGACTTGTTGGA TATAATGAAGAGGTTGTAGATATGAAGTTTATTGGGGATGATGAAAAATTCCTCGCCCTTGCTACAAATCTTGAACAGATTCGGGTTTATGACCTTTCAT CTATGTCTTGTTCGTATGTCTTAGCTGGCCACACTGAAATTGTTCTATGCCTTGACACCTGTGTATCAAGTTCTGGGAAATCACTGATAGTAACTGGAAG TAAAGACAACAGTGTTAGGCTGTGGGAATCAGAAAGCAAAAGTTGCATTGGAATTGGCATAGGTCACATGGGAGCTGTTGGAGCCGTTGCCTTTTCGAAG AGGAAGCGAGACTTCTTTGTTAGTGGTAGTAGTGATCATACTCTTAAAGTGTGGAGTATGGATGGTCTCTCAGACAATATGACAGTGCCGATTAATTTAA AGGCAAAAGCTGTTGTTGCAGCTCATGATAAAGATATCAATTCTGTAGCTGTCGCTCCAAATGATAGTTTAGTATGTAGTGGCTCCCAGGATCGCACAGC TTGTGTATGGAGACTTCCGGATCTTGTATCTGTAGTTGTATTTAAAGGGCATAAAAGGGGGATTTGGTCTGTAGAATTTTCTCCTGTTGATCAATGTGTC ATAACAGCATCTGGTGATAAGACAATAAGGATATGGGCTATATCAGATGGCTCATGTTTGAAGACATTTGAAGGACACACTTCAAGTGTGTTAAGAGCTT TGTTTGTTACCCGTGGAACACAAATTGTTTCCTCTGGTGCGGATGGTTTAGTAAAGCTCTGGACTGTAAAAACTAATGAATGTGTTGCCACTTATGATAT TCATGAAGATAAGGTTTGGGCATTGGCTGTAAGTAAGAAGACAGAAATGCTTGCAACTGGTGGTAGTGATGCTCTTGTCAATCTCTGGTTTGATTCCACT GCAGCTGACAAAGAAGAAGCTTTCCAAAAAGAGGAAATGGGGGTTTTGAAAGGCCAAGAGTTAGAGAATGCTGTCTCAGATGCTGACTATAGCAAAGCAA TCCAAATTGCATTTGAGCTGCGCAAGCCCCATAGACTTTATGCATTACTCTCAGAACTTTGCAGGAAGCAAGGGGCCGAAGATCATATAGACAAAGCACT CAAGGCTTTGGGCGATGAAGAGCTTCGTACATTATTTAGCTATGTTAGAGAGTGGAACACAAAACCAAAGTTCTGTTATGTTTCACAACTTGTGCTTTTC AGAGTTTTCAATATCTTCCCCCCAACAGAGATTATTCAGATGAAAGGGGTCGGTGAACTTCTTGAAGGTCTTATCCCATATAGTCAGAGGCACTTTGGCA GGATAGACAGACTTGTTAGAAGCACATTTTTGTTAGACTACATTCTATCAGGAATGTCAGTTATCGATCCAGAATCTCAACAGCCAGAACCAAAGGCTGA GCTTCTGTTGCGTTCTGAAATCGAAAATCCAGACAAAGAAAAAGGTGCAGAGGAGAAAGATCATAGTCAAGAAAATGCTCCATCAAAGAAAAGGAAATCA AACAAATCAAGACAAGGTTCCCATAAGAAAGTCAAGGATGTAGCTTACAACAAGGTCGCATCTATTCCATTACAGGCATAGATTGGTGTGCTCATCGTCT CATATATACGAATACGTTTCTTCATGAATGGAAGAGCCTGTTTTGATTCATTCAATTTTGAAATTTTGCTGTTATTTAATATGTAAGGTGAAATGTTGTG ATTTGAGCTGTAATTGTTCAGTGTTTTATTCTTTCTTGCAGATTAGTTTTCATGTTCTACTCTAATTGAAACGAAATGTTTAGCCAGCTAGCTTACAAAA GAAAATTGTTTTGAAAGAAGTTAAATTTATAAGCATCAATCAAAAACATATACTACCCTTTCT BLAST |
Tissue | pods |
Gene name | LI_gene_181933; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_529192
Blastp | Transducin beta-like protein 3 from Rattus with 38.83% of identity |
---|---|
Blastx | Transducin beta-like protein 3 from Mus with 38.22% of identity |
Eggnog | transducin beta-like 3(ENOG410XPQD) |
Kegg | Link to kegg annotations (287120) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464039.1) |
Pfam | WD domain, G-beta repeat (PF00400.31) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |