| Id Trinity | TRINITY_DN51045_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_529194 |
| Sequence | GAAAAAACAAAAACAAAAACCCAAAACCTTGGTCCTTAAACGGTTAAACCCTACCTTCCTCCCCATTGAAGAAAAACCTAAATATTCCTGTTGTATTATC ATCATCATCATCAGTGACGCACTTGAACAATGGAACCTCTTCGATTGAAAGCCAATTACCGTTGTGTCCCTTCTCTCCAGCAGTTTTACACCGGCGGCCC CTACGCCGTCTCATCCGACGGCTCCTTCATCGCCTCCGCCTGTGCCGACTCCATCAAGATCGTCGATTCTGCCAACTCATCAATCAGATCTACTCTCGAT GGCGATTCTGAATCAGTAACTGCTTTGGCTCTATCTCCAGATGATAAACTTCTCTTCTCTTCTAGCCATAGTCGTCAAATTAGAGTTTGGGATTTGTCTA CACTCAAGTGCGTTCGTTCTTGGAAGGGTCATGATGGTCCGGTTATGTCCATGGCGTGCCACCCTTCTGGAGGATTGCTTGCTACTGGTGGAGCTGATAG GAAGGTCCTTGTTTGGGACGTGGATGGTGGCTTCTGCACTCATTTCTTTAAAGGTCATGGTGGCGTTGTTTCTTGTGTTATGTTCCATCCTGATCCAAAG AAACAACTTCTTTTTTCTGGCAGTGATGATGGTGGTGATAATGCAACCATAAGGGTTTGGGATGTTTCCAAGACCAAGAAAAAGAACTGCATTGCAACTC TAGATAATCATCGTTCAGCAGTGACTTCTATAGCAGTATCTGAGGATGGATGGACATTGCTTAGTGCTGGAAGAGACAAGGTTGTAACATTGTGGGACCT TCATGATTATAGCAATAAGAAGACTGTGATAACAAATGAGGCAGTTGAAGCTGTTTGTGTGATTGGTGCAGGGAGTCCTTTTGCTTCATCTCTGGATTCA TATCGGCAACAAGCAAAAAAACTAGCTGGTTCCAAATCATTCTATTTTGTTACAGTTGGTGAACGAGGCATTGTGCGTATATGGAGTTCTGAAAGTTCAG TTTGCATGTTTGAGCAAGAGGCTTCAGATGTTACAGCTAACATAGATGAGGAGGGCTCACGAAGGGGTTTTACATCTGCTGTCACGATTGCCTCAGATCA AGGGTTGATTTGTGTGACTGCAGATCAGCAGTTTCTGTTTTACTCTCTGGATTTAACTGAAGAGTTGTTGAAGTTAAATCTCACAAAAAGACTTGTTGGA TATAATGAAGAGGTTGTAGATATGAAGTTTATTGGGGATGATGAAAAATTCCTCGCCCTTGCTACAAATCTTGAACAGATTCGGGTTTATGACCTTTCAT CTATGTCTTGTTCGTATGTCTTAGCTGGCCACACTGAAATTGTTCTATGCCTTGACACCTGTGTATCAAGTTCTGGGAAATCACTGATAGTAACTGGAAG TAAAGACAACAGTGTTAGGCTGTGGGAATCAGAAAGCAAAAGTTGCATTGGAATTGGCATAGGTCACATGGGAGCTGTTGGAGCCGTTGCCTTTTCGAAG AGGAAGCGAGACTTCTTTGTTAGTGGTAGTAGTGATCATACTCTTAAAGTGTGGAGTATGGATGGTCTCTCAGACAATATGACAGTGCCGATTAATTTAA AGGCAAAAGCTGTTGTTGCAGCTCATGATAAAGATATCAATTCTGTAGCTGTCGCTCCAAATGATAGTTTAGTATGTAGTGGCTCCCAGGATCGCACAGC TTGTGTATGGAGACTTCCGGATCTTGTATCTGTAGTTGTATTTAAAGGGCATAAAAGGGGGATTTGGTCTGTAGAATTTTCTCCTGTTGATCAATGTGTC ATAACAGCATCTGGTGATAAGACAATAAGGATATGGGCTATATCAGATGGCTCATGTTTGAAGACATTTGAAGGACACACTTCAAGTGTGTTAAGAGCTT TGTTTGTTACCCGTGGAACACAAATTGTTTCCTCTGGTGCGGATGGTTTAGTAAAGCTCTGGACTGTAAAAACTAATGAATGTGTTGCCACTTATGATAT TCATGAAGATAAGGTTTGGGCATTGGCTGTAAGTAAGAAGACAGAAATGCTTGCAACTGGTGGTAGTGATGCTCTTGTCAATCTCTGGTTTGATTCCACT GCAGCTGACAAAGAAGAAGCTTTCCAAAAAGAGGAAATGGGGGTTTTGAAAGGCCAAGAGTTAGAGAATGCTGTTGCAGATGCTGACTATAGCAAAGCAA TCCAAATTGCATTTGAGCTGCGCAAGCCCCATAGACTTTATGCATTACTCTCAGAACTTTGCAGGAAGCAAGGGGCTGAAGATCACGTAGACAAAGCACT TGAGGCCTTGGGCGATGAAGAGCTTCGTACATTATTTAGCTATGTTAGAGAATGGAATACAAAACCGAAGTTCTGTTATGTTTCACAATTTGTGCTTTTC AGAGTTTTCAATATCTTTCCCCCAACTGAGATTGTTCAGGTGCTTTTTTTTAAACCTTCTATAGGAGGCTTAATGCTATTGCTCATCCATGTCTTGCATT TTGTGAATCATTATGACTGAATTGCTTGTGTACTTTGGACTTCTTTTCATTTCCTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_181933; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_529194
| Blastp | Transducin beta-like protein 3 from Rattus with 39% of identity |
|---|---|
| Blastx | Transducin beta-like protein 3 from Mus with 37.97% of identity |
| Eggnog | transducin beta-like 3(ENOG410XPQD) |
| Kegg | Link to kegg annotations (287120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464039.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |