Ll_transcript_528838

Id TrinityTRINITY_DN51057_c1_g2_i5
Name TranscriptLl_transcript_528838
SequenceTTCTGCGACAAAGCTAACAGCGAAACTTCGATTCAACTCAAATCTCATGTACGAAACCCTAGAATTTCTCCATTTCTTTCATTCTTCGATTTTCTGAAAA AGCCTTTGCTTATTCTCGTTCTTTCTGTTTAGACGCAGATTAATCATGGCCACGACGGAGCTGATTTTAAAACCGTCGTGCGGTGGTTGTGGTTCAACGG CCGATCTCTACGGAAGTAACTGCAAGCACATGACTCTGTGTTTAACATGCGGCAAAACCATGGCGGAAAACCGCGCCAAATGCGTTGTTTGTGACGCTAC TATCACTCGCTTGATTCGAGAATATAATGTTCGTGCAAGTACTAGCAATGACAAGAACTATTTTATTGGAAGGTTCATCAGTGGCTTACCTGATTTTTCA AGAAGAAGAGTGCTGAAAACAAGTGGTCTCTGCAGAAGGATGGACTGCATGGGCGACAAATTACCGAGTCTTTGCGGGAGAAGTACAAGAATAAGCCTTG GCTCTTGGAGGATGAAACAGGTCAATCCCAGTACCAGGGTCATCTAGAAGGTTCACAATCAGCTACATATTACCTTCTAATGATGGAAAAAAAGGAGTTT TTTGCCATTCCTGCTGGTTCTTGGTATAATTTCAACAAGGTTGCACAATATAAGCAATTGACTCTGGAAGAAGCAGAGGAGAAGATGAAGAACAGAAAGA AAACTGCAGATGGATATCAAAGATGGATGATGAAAGCAGCAAATAACGGGCCTGCTGCTTTCGGCGAACATGTGAGGTTGGAGGACAAGGAAACCAACAC TGGTGGAGGCAGAAGCCGTAAAAAAACCGGTGAGGATGATGAAGGCCATGTCTCTGATAAAGGGGAGGAGGATGAAGACGAGGAAGCAGGAAGGAAGAAT AGGCTTGGACTTAATAAAAGAGATGGTGATGATGATGAAGAAGGTCTAAGGGGAGGCGACCTTGATCTAGATGATGATGATATTGAGAAGGGCGATGACT GGGAGCATGAAGAGATTTTCACTGATGATGATGAAGCTGTTGGAAATGATCCTGAGGAAAGGGAAGATTTGGCTCCTGAAATTCCTGCTCCTCCTGAAAT CAAACAGGATGAGGAGGAGGAGGATGAAAACAATGAAGAGGGGGGAGGTCTGAGTAAATCTGGGAAAGAGCTGAAGAAACTTCTTGGGCGATCTGGTGGT CTAAATGAATCTGATGCAGAGGATGATGAAGATGATGGCGATGATGGCGATGACGATGATGTGGACGATGAGGTTGGTGTTCTTCCTGTGATTGCTACAA AAAATAAGAAGGAGCCTAAGGAAGAACCTGTTGACAACAACCCTTCAAAACCCCCAGCAACAGGTCCTTCTCGCGGAACACCTAATTCAAAGTCTTCAAA GGGGAAGAGAAAATTGAACGAGGAAGCAAAACCATCTAATAGTGCTCTACCGAAGAAGGTGAAGACAGAAAATGAATCAAAAGCATCTGTCAAAGATGTA AATGGGTCTGCATCTAAAAGTAATGCACCTCCAAAAGGCACACCTTCAGCACCTCCACCATCAAAAGCTGGTTCTTCCACCACAGCTTCTGGGCCTGTGA GCGAGGAAGAAATTAGGGCTGTTTTAAGGCAAAAGACTCCAGTGACCACACAGGATCTTGTAGCTAAATTTAAGGCTAGACTCAGATCTTCAGAGGATAA GAAAGCGTTTGCAGAGATACTGAAGAGAATCTCTAAGATACAGAAAACTACTAATGGATCCGGTTATGTCATCCTGAGAGATAGTAGGTGAGAATGTATT ATTTCAGTGTGCGACTCCTGTTTTTTAAACTCCTTCAAAAACTTGACTTCATACTTCACAAATGGTTTACAACTTCCAAATGGGAGTGAAGATGGAGATT ATATGTTCCAGCTTTTACAAGTTCAAATGTGTAATAATAGTACTTATACATACTATCATTACAGATGTTTTTCCTCTCATTACTTGTTACCTTATTACAA ATTATTATAGATGACACTCATAGATCTTATTATAATTTATCTGCATTTCAAAAACCATTGTGACTCGTGTAAGATAACTTATGATCTTTAACCAATGTAC TTTATTAATAGGAGGTAGCAACAGATTACAAAATTAGTTTGACCATAACTACAAAACCACTAGTGTTTCAAAAATGATATAACGATATAGCAATAAAAAC AAGCGTAATAGCACTTATTGCGACTAAAATATGGAGAACCTTTGTTTCTTTGTGTTCTTATTTTTACACATTGGTTGGTGCCAAAGAAATTTACTATTAT ACAATATCAATGATGCAATACATTCTTCTTAGACACTAACTATAATTGTCTGTACCGTTCAAGAATAAAGAAATATAACAAGGCTGGACCTAAACACACC AAGACACGAGACAAAGGTAAATTAATATAGCTAATAGAGAAAACAATATGCAGTATCAGTATCCAGCGTTAGCTGTGATGGTCGTAATCTCATCATGGAT GGGCAACGCAAGCTTCTTCTTCCTGCTTCCAGCTGCAACCATCAGGTTATAGGCTAACACCACTGCCTTGGGCAACAAGACTAAAAATCGCAATAGGTGC TGCTAAGGCTCTTTCCTTCTTGCATGGAGCTAAGAAACCAGTCATTCATGGAGACTTCAAGAGTTCTAATGTTTTGCTTGATTCAGACTTCACAGCAAAA TTGTCGGATTTTGGACTAGCAAAAGTGGGACCTGAGGGATCAAAATCACATGTTACAACCAGAGTTATGGGCACCTATGGATATGCAGCCCCAGAATACA TCTCAACAGCAGGTAAACTTAACTTAAAAAATAAAGAGCTATGTTCAAATAACAATGAAGTCATACGCACATATGTCTAGATTGGAATATCAAATTATAA GCTTGGAGGATCAAGTAAAAGCTTTGGAAGCAAAACTATCTGTAGTTTA BLAST
Tissuepods
Gene nameLI_gene_182021; 
Additional informationdetails; 

Expression of Ll_transcript_528838

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_528838
BlastpTranscription initiation factor IIF subunit alpha from Arabidopsis with 63.48% of identity
BlastxTranscription initiation factor IIF subunit alpha from Arabidopsis with 75.83% of identity
EggnogGeneral transcription factor IIF, polypeptide 1(ENOG410XSRW)
KeggLink to kegg annotations (AT4G12610)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019425985.1)
PfamTranscription initiation factor IIF, alpha subunit (TFIIF-alpha) (PF05793.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;