Id Trinity | TRINITY_DN51058_c0_g1_i3 |
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Name Transcript | Ll_transcript_529611 |
Sequence | AATGAATGAAAAAATGAGAATAAAAATTATTTAAATTTAATATATAATCACATAACTAAATATCATATATTAGCAAAAAAATGGAAAATAAAAAAGGTTT ATTCAAGTTTGAAGGTACTACAAATGGTAAAGCATCTTCTCCATTGTATTAGCCAGATTCCCCTTTCATTCCTTCAACATTCTTCATCAACGCTACGAAT CAGACCAATCTCTTCCTCCACCATCAAGATGGCAGCACAAGACTACACTTTTGGACCTTATAAGATACACCAAAATGAAGTCTTCTATTCTACTCATCTC TCTTATGCCATGGTTAACCTTCGTCCTCTTCTTCCTGGTCATGTGCTTATCTGTCCGAAGCGTGAAGTGAAGCGTTTCGTTGATCTCACTGTCGATGAGA CTTCTGATTTATGGTTGACTGCTCAAAAAATTGGTAGGCAGTTAGAGAGCTACCATAAAGCTTCATCACTTACGTTTGCAATCCAAGATGGGCCCCAAGC AGGACAGACAGTACCTCATGTCCATATTCACGTTGTCCCCCGGAAAGGCGGTGATTTCGAGAACAATGATGAGATATATGATGCGATGGATGAGAAAGAA AAGGAATTGAAACAAAAGCTTGACTTGGACAAGGAGAGGAAAGATAGAAGCCTTGAAGAGATGTCTCAAGAAGCAGCTGAATACAGAAAACTTTTCCTGT AACACTTCAGCTAGATATAGAATCAGAATTCCACACTCTTCAAGTAGAAAAATTATTGCACTTCCTTTAAGCAATAGAAAAATTTATGCCATTACTTTAG AATTGAGCTGTACTGAACTTTACAACTTTCACTAATTCTACTTTTTTGGAAAACTTCTTATGATTGATGGATACATCTTGCATTATTTGTGGAGTCAAGA TCAAAGTTTCAAGGGTTTATGATCTTGCATTATTTAGTGTATATATATGTATTGAAAAAACACATATATAGATACTAATTTCTGTTTTTTTACATAAGTT TTCTACAAGAGATCATGTGGAACAAAGAGAAGTATTTGTATTTTTTTTATTGAATTGATGATGTCTTCTATAAAGACCAATTATTTTGGTTGTTGTATTT GTATTTAACAACAAAATATTTGTTTCAAGTTATAACACATTGACTTTTTCAAACTTTTGATACTTAAGAAATTCAGGTATTTACCAATTATTTTTATTAT TGTTTGTGTAGTTGTTAGTTGTTACAATTTTCATCCTTTAGATCTTTAATGACAAAATTCACATTTTGTCTAAACGTGATAAATAGATGTCTTCCAACTA AACCTTGTAATTGTAGTAATAGAAAAAGTTGGCTGTAGTAATAGATGTATGTGGGATTGTTTAAACATTTCATAAATAAAACCTTCTTGATCTCTATTGG TTGATGTCAATTTATGGACACTGGTTTTGTTGGGTGTGCATTGTCAAGTAACATGGTATGCTTTTTAAAGACCCTAGATGGGTCATGGTTCCATGAGGTA TACAACATGATCTTCTGGTAGTCTTTAAGTGCGCTCAAATGCTTTAGTTGACACATTTTTGTAAGTTTTAGTTTGGCACGAGCCATGGTTTTTCCTAAAT ATGAAATTGCTTTTGGTGACAATGATGGTCCTGCTGCATTAGTTTTAGTAAGTGGAGAGAAGGCACTAAAGCTTGGGCTTCAAGTTATTGC BLAST |
Tissue | pods |
Gene name | LI_gene_182025; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_529611
Blastp | Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT from Arabidopsis with 72.35% of identity |
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Blastx | Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT from Arabidopsis with 72.35% of identity |
Eggnog | histidine triad (hIT) protein(COG0537) |
Kegg | Link to kegg annotations (AT5G58240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439570.1) |
Pfam | HIT domain (PF01230.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |