Id Trinity | TRINITY_DN51063_c0_g1_i6 |
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Name Transcript | Ll_transcript_529297 |
Sequence | CACGGATCTAAAGTAGAAATGAGCACATAGGATAAGCGCTCGGTATACTGAAACCGTTAGATCTTTAATCTCTGAACATATTCATTTTGAATCACAATCT CTCAACAAAATTCAACGATTCTGTTCCTTCTCTTCCTCCTCGAAACTCGTTAATCGAAACCCTAATCAGCTCCTTCACTTGCTCCATCTCATTCCGATTT CACTTTCGGTAAGATAAGCTCCTTCCTTCAGATCTCAAATCAATTGTTTTATACTTTACTCGATTTTACGTTTCAGTCTCACATCCTATGCATGTTTCCA ATTTCATATCTCAATTTCTAATTTATGCAAAAACTTGTTTAACAGTTTCCATGCTTTTTTAATTTTTCATCGTTTACTTTAATCGAAATGTGGAATCATG ATGGTTCAGTCAATCGAAATCATTATCCTGAGATGTATTTAGTTTGAGATTCGTAATTATTGACAAGACTTGCAATTAATTGAATGAACTAAATGTTAAA AAAAATTGTATTGGTTATCCTGTATTCTACTAACATTATGTAGGTATTTGGAAAGAGACTGTAGGGACACCTAATGATAGGATATTCAACTACTGCATAA GTTGCTATTGATACCTTTTTTGAATCAAATGGAGTCAGTGCCTTCTGATGTATCTACTTCACCTCCGGTTAATGAGACCGGAGGACAAGCTTCTTCGGGT GTAGTATCTGGGCAAGATAATTATGCACATGAGGCACCATCTAGGGTGTCTCCCACTGGCATATCATCTTGGGCTAAAAACTTGAAAGTTCCTCAGCCAT TTTCTGGCTCCCAAGATGAAGCGTCAAGTGGTAATACCGGGAAATCAGCTTTTTCACGCATTACTAGCAATATAGGGCTGCGGTTGTCTCCGAAATCTCC TCCCGTGGCAGAGGACAGTTCCAGTGAAACAACAGGGCAATCTAACTTTTTTGGAAGTATTACAAAAGGCCTCGTTGATACTTCTAAGAATGCAGTGAAA GCTGTGCAGGTTAAGGCACGTCATGTTGTTTCTCAGAATAAACGCAGATATCAGGAAGGAGGCTTTGATTTAGATATGACATATATCACAGAAAACATCA TTGCTATGGGGTTCCCTGCTGGTGACATGAGCTCTGGGTTTTTTGGTTACGTTGAAGGATTTTACAGAAATCATATGGAAGAAGTGATTAAGTTTTTTGA GACTCACCATAAGGTAGTAAGACATACTCTAACACATGAGATCACAAATAGTTATGCTTATTAACTTTCATTTAGTGCTTGTATGTAAAGTATTTATGGT TGATATTGAATACTTGTTTGAATCTGTCTCTTAGAAGTTAGTGCTGCCATAGTAATATGCCATCCATTCTGCCATAGCTTATAGGAACCTGCTTGGTCTT GGATATATTTAAATTCCCCTGCATGCATGCAATAAATAGCTGTAGGAAGTATTGAATTGTGGAACTTCTCTAAGATTTCTTGGGCTCTATCAAATTTTCT TACTTTGACAGTCATAAATTATTTTCTGTGTTGACTTATAAGCAGATGCTCCATCTGTTCTGTTATCCTGCCGCTTTCTTGCAGATTTTGTACTTTGGTA ATAAGTTTCAGTAACAACTTAAATTCTATCGTTTTCTCTTAGAGTGCCTTACACTTTGAAAACTAATGAGCCTTTATCTCTACTTTTCATTTTCTTGACT AATTTTGCATTTGACTTTTTTTTAATGTGCAGGATAAGTACAAAGTATACAATCTTTGTTCAGAGAGGTTGTATGATGGATCACTATTCCAGGGGAAGGT GTGATTTTGATCTTTATTTTCACTTTAGCACTCATTGATATACAGTATGGTGGGTGGTCTTGATGGTTGTGGACTTGAGGTAGATTTTTAAAATGTATCA TCTACATCTCTAGTGTACTGGACATAGCATTTCTTCATTATATTCAACTTCATTATAGGTTTTCTTTTTTCTTAAATTATCCCACGAGACCTTGGGAAAG AAGAATAGGAAATTAGGAATTAAGCACAAATTTGATTATAGACAACATTTCCAGGTTTTTATCATGATATCAGTATGCAGTTTGTGCACTATTGATCATA TTATGAACATTTATGCTTATGTGACTGAAACTTTGTCAAGGTGTATTATCCCAGGCTCCTAGCTTTATAATTTATTTTTTATCCGTGTGTTGCAGGAATT TTATGCCTCTGAAAACGTGTGTAAGAGATAAAAGTAGTATATAAATATGCAGAAAATATTTTTTTATTAAATACAAAAACAAAAGCAAAAAACAATACTC AACATCCATTTAAGTCCTCCAAAGATTCTAGTTTCATCAGCATGGTCCTCCAATAATAAATATATCTCACTGATTATTCAATGTTAAATTCTAAGGACCA ACTAGATGTCAGAAAATGAATTGAAGAACTACTTTGATGTCAATTTTAGCATTGAAAGACCATTTTCATGTATTTATTATTTTAGGACCAAACTTTTAAT GCTTGTATGTTTGTAGGACTAAAATTGGATTTTAATATAAAGAAATAACAAATAAACCACCGATTGATCTTTATGAAATTATTACAATGTCCATCATAGT TGTTAGATCAATTAACCTCTTGGGGTTGTTTTCAGGTTGCAACTTTCCCATTTACTGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCA AAGTACTTATTCATGGTTGAAGGGGGATATTCAAAATGTGGTGGTCGTTCATTGTAAAGCTGGCATGGGGAGAACAGGACTGATGATTTGTAGCCTCCTT TTATTTCTTAAGTTCTTCCCAACTGCAGAGGAAGCCATTGATTACTTTAACCAGAAAAGATGTGTAGATGGAAAAGCTCTAGTTCTCCCTAGTCAGATTA GATATGTCAAATACTTCGAACGGACTTTATCACACTTCAATGGAGAAGTTCAGCCTGGGCGAAGGTGCATGCTAAGAGGGTTTAGGCTTCACAATTGCCC TTATTGGGTTAGGCCATCCATTACAATATCTGATCACAGTGGAATTCTTTTCACCACGAGAAAGCATCCCAAGACAAAGGATCTAATGCCAGAAGATTTC TGGATCAGTGCACGGAAGAAAGGAATTGTGGTCTTTGCACTACCAGGAGAGCCTGGCCTGACAGAGTTAGTTGGAGACTTCAAAATTCATTTTCATGAAC GACAGGGAGATTTCTACTGAATCATAATGATTGTGCTTGGGGATGAAAATGTTTCATCTTGATAAAATATTTGACTCCCAACTATGCATTCAAGATTTGC TCTCTTCCAACCTGTGTATGCTATGAAAAAGAGTTGCTTGTTTATGCATAAATTAGCAGTTTCCTTGATATATCAGTTTCTTCTTGGCAGTTGGATGAAT ACAACAATGATAGAAAACCGAACAATTCTGAATGGCTCAGATCTGGATGGTTTTGACAAGAGAAAGATCCCTGCTCCAGGATTCCAGGTCGAAGTTGTGA TGGTAGACTATAATGGCACCCTACCTACTAGGACAAAAGCCAATCCCTCCAGCAAAGGATCTGATTGCAGCACAAACAATGATCAAGTCAGTGCAGGGCT TGCATCTAATTCAAGTGAGAGCAAGGCCCCTAAAAATGGAGATGATGACGTATTCTCGGATAGTGATGAGGAGGAGACCCGGGATACACAAAGCAGGAAA GCTGCCAGTGAATACAGATTTGCGGCACCTCATCAAGTGTCTGAGGCCACTAATGACCAAGCAGGGATGTTACATAAGACGGATCAGTTGTCACACCAGC ATGAGGGGCGCACGCAAAATAATGCTTCTGTACAATCAACTACAGATGATAAAGTTCATACAGGGCCAAGCGCTACCATGGAGTCGGTAAGGGCAAGTGA ATTCAGGACAATTGCAGCAGATGCTTCAGTTTTTTCTTTTGCAGATGAAGATTTTGAAAGTGACTGAGGGGATAAGGGAATATGATATTATTCTGGAATT CATGTGGTAACCCTTTCCATAGAGATCAAACTTAGATACTTTGACTTTATGTCATTGCATATTCCTCCTACGAAATGATTAGAACCGTTGTTACTATGTG AAATGAAAACAATTAAAACGAATCATTGAATTTTATTTGATTGGTTAAGATTGAAGTGATCATGACAATTGTATGCCATAAATTTATTATTCCTGCCATT TTTACTTAAGAATTGAATTGCTCGCTTTTGAGTTAACTCATTTCCTTCCTATTCTTTATCAAGTATAGATGTGCGAC BLAST |
Tissue | pods |
Gene name | LI_gene_182065; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_529297
Blastp | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A from Arabidopsis with 42.57% of identity |
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Blastx | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2B from Arabidopsis with 48.44% of identity |
Eggnog | dual specificity phosphatase(COG2453) |
Kegg | Link to kegg annotations (AT3G19420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_003611670.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |