Ll_transcript_530162

• Id Trinity: TRINITY_DN51069_c5_g2_i1
• Name Transcript: Ll_transcript_530162
• Sequence: CTTAAAACAAGTTTAGTGGAGAGTGCTAAATCTTGCAGTTCTAGCTGTATCGAAACGGGTCCCACAACACAACACTTTTTTCCCTTTCCCTTTATCACAG GATAATGTAAATAAATATCTTCTTCTCTTCTCATTCTGAACCAAACAAATCCCTAATCCCCTTTTCCATGTTCTTCTTCTTCTTCTTCTGCTATCGATTA CCTTCACAAAATAAACCATTTTTCATCTCTTCCCTTTAAAGCAAAACCCTTTATTCAAAATCAAATCTTGATTCTGTTTATTTCATTTGATTGTTAGATT TGATAAGAAGAGAGAGAGAGTTGTTGGAAATTGGAAGAGGATGAAGAGAGAGAAAGATGAAGAGAAGGTGGTGGGTCCCATGTTTCCAAGGCTTCATGTG AATGATACAGAGAAAGGTGGACCAAGAGCACCACCAAGGAATAAGATGGCACTCTATGAACAATTTAGTATTCCTTCTCAAAACCTTAATCAACTTGGAT CTTCTAGTCAGGGGACCGGGTCTGGGAGGAGGTATATCATCCCGTGTCATTTACCTACACAAATGCCGACTCATCGAGCTGAGAGTTATATTTCTCAACA GTCCAACGGGGCAAGACAGAACACTTCATTGACACATCTTGAACAGAGAAAAAAATTAGATGAAGATGACTTTATGGTTCCTGTGTATGTTGATTCAAGG ACTGGTCAGTGTAATGATAAAAGATTAGAGAGCTTTGATAGGAAAAAACTCACTTCTATGGGCTCCAGGAATTTTGGTTGTTCGTTAGAAGTCCAAAAAG ATGGTGGCAGGCATCTAAAACAACTTGGATCCCCACTTATCAATATGAGAGAAGATGCAAGCAGTGAGAGTGAAGGGCTTCCTGAAGTAAGCCCAAGTAG AGATCCACCAGCTGAAAACGTATCAACTGGACAAACTATCAAAAGTTTAGTTAAGCAAACCAAGGTGATTCAATATCAAGATTGTCCTGTGTCATTTGTT AGCAGTTTATGTCAGGCTGATAATTGCTTGCAGCAGGAGTGCGTAGCAGGCTCACAATCTAATAACATTGAACATCGTCATCGTGAAGGTCTACTTGACT CTACAGGGGATACAGACAAGGGAAACACCATTGTACCAATGGGCTGCTCTCGTTCTCCGACAAACCAAACCAGTCCAGTTGAGGCAACACATGACACTGA ATTTCATGATACCAGGACTGGAAGCCCGGTACAGAAGGGTAGTTCAGATGAAAGTGATGATGTTTCCAAGATCTCCTCCATAGGAAATTTGTCGAGCTTG AAGGCTTCTCCTGATGATGTTGTAGGGGTACTAGGTCAAAAACGTTTCTGGAAAGCAAGAAGAAAAATTGCCAAGTAAGTTTTATTGATTGTCAGTTGCA TCTGTTTGACAGTTGAACTATTTCCTTGTGAAACTCTTTTCTGATTTATGATAAGTGGAATCTCTTACGTGCTTCGGCCTGATTTATGATAAGTGGATTA TCTTACACACTTTGGCCTGATGGTATTCTCTTTCATGGATTCTTTAAATTGATTTTTTATTTTATTTTCAAAGTCCTCAATAATGATTTAATGATAGAAC TGGATGATCTTATAACAGGGCTGTGAGCAGTCTTAAAATATTGTACTATATTGGTGGGGGACCCTTGTGACAGCAAATCAGAACATTATTCAGTGTTTGG ATATATTCCTGTCTTGGTTTCCTCTTTGTTCGCCATGTGACCACTGGGGCAAGTTTCCTTACTGCACTACTTGCCCTTGCTGCACTGAAGGACTAGGAAA GAGGGGACCGAGTAATGCAGGATGATCCCAGGGAGTATGGCAGGGACGTTTAAGAGAGCATATGACGACTTGGTTATTCATTGATAGATGTTATGACCAT AGAGGGATCTTTTTCTTCCTTTTTCACTATTTATCTTATTTTTTTCAGTTTTATGTGTTAGGCATTTTTGGGTGGAGCAAGTTTAGTTAAAGTTCTTTAG GTGCCTGTGGTGTTGTTTACCAATAAATACATAACACATCCTAATTTTTAGTCACCTCATTAATGAACTGTAAGAAAATTATTCACATTATGTTTTTTAT TGGTGAATAGCATCACAAGCATCTAACAAACCTTACTTAAGTTTGTGCTTTTAGGATTGATGCTTTTTTTAAGAATAATACACACTGTAGTTAGCTGAGG TGTCAGGCCATCTATAGTTCATATAGATAGATAGATAGATAGATATCTTTTTGTGCTTGGAAATACGTGTTAGTTTGCGTAAGTGCCCCCAGAAAAAGAT AAAGACAAAACTCTACAAAATTTCCTGGTAGTTGATTCTATTGGGAATGCTTAGTGTACCCACTTTTGGTTGTATGCCCGATGGTTCCTCTAATCCTGTT AGAGCCTGGTTGTTTTCAACCTGAAACACTAAAGCTCCACAAATATTCCTTTTGAATTATGTAATTTTTTTTATGCTATAACCCATAAGCAATATTTTAT TTAGTATTGCAATGAACATTTACTATTTTAAACCTTGTGATGAAGCTTGTTGAATCATTGAAATCTATGACCGAAGAATACGCATGTTTTCTTTATGAAA CAAGCATATGATTATGTATGACATGTATCATGTATGTCTTGTGAATACATTTCAAGCCTTCCTGGAAGAGTCATCAGTCATGTTAAGATTTCTTTGAGTG TATGTATGTGTTCTAGAATGCTAGATATTTGGCTGTGACTGGGTTTTGGTAATTATTTGTTTATATATTTGTTCTTCCAACATTATCACATTTATCACCA AAGGTTTCATTTTCCATTTTATTCTGATTATATGTGTCTTAACTTCCAAATTGGATGAGTATTATGCAATTTTCATGATAAAACTCCCCTTCCTCTCTAC AGTCAACAGAGAGTGTTTGCAGTCCAAGTGTTTGAATTGCACAGACTTCTAAAGGTCCAACATCTGATTGCTCGGTCGCCAGATCTTTTGCTTGAAGATG GTGCTTTTATGGGAAACTCTCTTCTGCAGCGATCTACTCCTAATGTCGCCCTGGAAGTTGTTGTTAAACCTCAGCTGCAAAATCATAAGCGTAAAGATGA TTCTGAGAAACTAAACCATAATAAAATGGAATGTTCTGCTGAGAATGCAGTTGGGAAAAGATCTTGTTCGACCCCGAAAAATGGTAGCCACCATTCTAAT TACACCCCCTTCTCTGGAAATCTACAGCAAACAAAAGCAGCTGCTGATAATAGAATGGGTTCCTGGGGTTTCAACCAGTCACCTGGACATCAATGGTTAA TACCTGTTATGACTCCTTCTGAAGGTCTTGTCTACAAGCCGTATCCTGGGCCTGCATTCCCAGGAACGATGTGTGGAGGAGAATGCGGACCCTTTGGGCC GGGTCCTCCGGGTGGTACTTTCATGAATCCTTCCTATGGAGTTCCACCACATATTTCTCCAGGCAGCCTTACCTACTTCCCTCCATATGGCATGCCGGTT ATGAATCAAGCCGTGTCAGGGTCAAATGATGAACAGGTGAACCATTTTGCTGCACAAGGTTCTCATGATCAAAATGGCCATTCACTTGTAGAGAGAGCAA ATTTCAATACTCATAACCAAATCTCACATAATTCACCTGTTCAGAGAAAAGGAGCTACATCACATGTCAAGAAATCTCAGGCATCAAAGAAGAGTGAGTT ACAAGGGAGCACAGCAAGTAGTCCTAGTGAAAAGGCACAAGGAATCAGACAAAGGCAAATTGCTGAAGGAAGAGATGCACATTCTCTTTCCCATGTGGCT GCATTAATACCAGAGGGCGACCTTCAGTCTCTTGAAACCAGACCGCAGACACGAGTAATCAAAGTTGTTCCTCATAACCGAAGATCCGCAACAGAATCAG CAGCTAGAATTTTCCAATCAATCCAAGAAGAAAGAAAACAGTATGATTTAGTGTAGTGATGTTTAATAAGTGGATCCTTTGAGTTGAGTGTTGATGGTGT GTCAAGTTGTTACTGTATTTTACTTCTGCTTTTGGTTTTGAACTAAGTACAGCATATTGGTATGTAGATATCAATTATCTATATAAAATCAAAACCCATC AAATGAAATAATAAATATATATTGTCTTAGGATCACTTAGATTTTCATTTTTGGCATTGGAATTGGTTGGTGAAGAAGTGATTGTCAT
• Tissue: pods
• Gene name: LI_gene_182101;
• Additional information: details;

Expression of Ll_transcript_530162

FPKM

• PAB: 0.7
• PNAB: 1.5
• PS1: 1
• PS2: 1.7
• PS3: 0.4
• PW1: 1.3
• PW2: 0.5
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_530162

• Blastp: Protein EARLY FLOWERING 3 from Arabidopsis with 35.73% of identity
• Blastx: Protein EARLY FLOWERING 3 from Arabidopsis with 39.03% of identity
• Eggnog: early flowering(ENOG4111XSP)
• Kegg: Link to kegg annotations (AT2G25930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429528.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;