| Id Trinity | TRINITY_DN51072_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_528928 |
| Sequence | GGTATGTTGCAGATAGGAGTCCTAATTGGTTTAAGACATTGAAAGAGTATCTTGATTCTACTCCCTCTGCTGCTGTTGGAGAGATTGGAGTGGACAAAGG ATCACATGGAAGGACTATTGATTTTTCCGAGCAGGTTGGCGTATTGAAGCAGCAGCTTGAACTTGCAAAAGATTTAAACAAGCCAGCATCTGTACACTGT GTTCGTGCTTTTGGTGACCTTCTTGAGCTAATGAAATAATGTTATCGCCTCCGGAAGACATTGTGAAGTAGGGCAAGAGTCTAGATAGGGTTCTCCCAAG GGGTGGAGAAGGATTGAGAGAGACATGAATCAAACACAGCCAATAGAGTGGTTGTTTTGGTATGACAAACCTGGAAAGAAGAAAATTCTTACTGATCCTA CTTATGGATTTAAGATTCAGGAAATTGGTCTGCTATACTACTGCTGAGGGTTTAGCCTATAATATGGTGCAAGCTAAGAACTTTCAAGTTAGACATGACT TGCAGACTACATTTATTGCCAATTCTTAGTTACAATTATTATACTTAAACTTCCTCGGCACAACTTACTAGAAAGCAAGTTACAAGAAACTGCGAAAATG TACTCCTTGGCTCTTACCACTAACCCAAACCTATTAAGATTCCTTGGTACATAGAAATAACTAGAATTCTTAAAGCATAAACATGGCCTGAAATACTACC CATAACAAGAAGCTATGAAAGTTTTAGAAATTATAAAAAAAGAACCTGCTCATAAAATGTGTAGGATACCTTGGCTCCACGCAAGGTAAGGTTACGTACA TCTACCCTTCCCAGACCCCACTAAGTAGAAGCCTCATACACTAACTTGCGAGAGTAGTTAGTAGTTACAATTTAGTTATATAGAAGAATAATTTGGCTCA GAGGCTTACTTCCTGATTATTTTCATAATTGGTCATTTTTGGTTAACATGCTTGGTTAGATTCTCATTATCCAATGGAATGCCATGGAATTAGTGTTATA TTGATATTGATGTTTTTATTGAGCAATCCGAAGTGGCATCTTCAAAATTGGCCGCCTTAAAATTTTCAACATATCCAGGTCTGTGGGACCTTTTCCTGCT GGTGTCATTCTTCATTCTTATTTGGGTTCTGCTGAGATGGTTCCTGAATTTTCCAAGCTTGGGGCTTATTTTTCCTTCTCAGGGTTTCTTATGTCACTAA AAGCAAGCAAGGCAAAGAGAATGCTGAAGATGGTCCCTTCTGATAGGATTTTGTTGGAGACTGATGCTCCTGATGCACTACCAACTTCAAACATAGATTC TCTTTTTTTTGTTGAAGGAGATACTTCTCTCCCCAAAGAGCTTCATGACCAAAGAACTTCATCCTCAACTTCTACTTCATTCAGTAATTCATCCCAAGTC GTGACAGATGCTTCGATGTTGTCAAAGGAAACTCTCAATCATCCGGCTAACATTCGTAGTGTATGTAGCTCATGCCTTTAATGTCACCTTGATTTTTCAA AATAAGCATCTGTCACTATATCATTCTCTTGGAGATATATGTTAATTTTTTGTATAGATAAATATTATTTTAGCTTGGTTTCTGGAGATAGTAATTAGGA ATAAATTGCCCTGAACTCCCTTGAAGCTTTCAAAAGCTGCCTCTTAGCAGTCTGTAGTTACCAAAATTTCTCCAATATTAGTGTTATTTCATGCATAAGA AATGCTATATGGACGGTGTAGGTATAAGGAAATGAATTCAACCCGGGTATAGGTTTCTTAAACCTGAAGAACTTCAACTTAAGCGAAAGATCTGATCCAA CTGAAATCCCGCATATCCAGTCGAAGGCTAGATCCCATTTGGTAGTTCAAGTAGAGATTTTAGGCTAGCCATCTTTCAGTGCAAAGGAATTACACTTAAC TTCAGGGATTCAAATGCAATATTTTACTATATCAGTAAGGATGAAACATGGCAAAGCCTCAGATGAAACAAGTAGGGATATTTGTTAGGTATATTTAATT GAGAAGTCCCAAATTGGATATGAGGTGATGAGTGGGCTACTTTATAAGTGAAGAAGATCTACAAAACCATTTATTTAAGGTTTTGGTTCAAAGTGTGTTG TCTTACTTATGGGTGGCTCTTCGCTCTTCCCATGACCTGGTAAGTGGTAACAATAAGTCTCCCTTGTGGTTGTTCCGGGTCGCGCCTGGGTCCAACAAGT GTTATTTACACTAATGGCTCGGTTGAGACATGGTAGACTTAAAGGGGGTAGACTAGTAAGTGTATTATACCCACACTTGAAGGAAGATTGCTGGGCATAT TCAAGTGTGAAGATCCACATTGGATATGAGAAGATGAGTGAAGCACTTTATAAGTGGAAAAAACCTACGGATTATTGTCTTAAGGTTTTAGTTCAATGTG TGATGTGTCACTTATGAGTAGCTCTTCACTCTTCTCATAGTCCGATAATAATGGGGCTCTTAGTGGTTGGAGTTTTTCCAGTCGTGGTCGAGTCCAAGAG CATTTGCTATCAGTATATACATCTAGAAGAAAATTCAGGAGGTGTTAACAACTGAACAAGTTGCCAACAGTGTATAGACAACTGTTTGGTTAAATTTATA GTCTTCAATTCATTCCACTTACAGGTACTTGATTATGTTGCATCTATGCTGGAGATTACCAAAGAAGAACTTGCTGAATTAAGCTACCAGAATGCTGTTC GCTTATTCTCCTATGAAGGTTCCAAAGTACTTCAAAAGTAAACAAAATATCAGGTTCTTTCTTGTAAGAAATTATGATTCCTTACTAGGCAAAATTTATT TGGAAAGTAACTTTCAGGATATTGAAGCAGATAGATTGGATGATAGTTTGCCTGTTTTCTAAAGTTAATTGTATCAATTGTTTCTGAGCATATAATGGTC ATGTTATTTATCATCAGTTTTATTAGGAAAGGAATATGATAGATATGATATTTGGTTATTTAGATTTAATTAAATAGTTGATAATATATTGATATTTCTA CAATGTTCTAGAGTTGTAAGATTATGACACTTGTAGGGTCATCATCGTATCCTATTGTCTTCCTTCTATTTAAATATGGTATTCTTCATCCATAAGACAA TCAATGAAAAATGAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_182122; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_528928
| Blastp | - |
|---|---|
| Blastx | Uncharacterized metal-dependent hydrolase YabD from Bacillus with 38.57% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000065) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442900.1) |
| Pfam | TatD related DNase (PF01026.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |