| Id Trinity | TRINITY_DN51075_c1_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_530244 |
| Sequence | CTCCTTCTAACAACAACACTCTTCGAACATTTCAATTCAATGGCTCAATCAATTACCCCAAATGCTATTTCAGCTTTACTTTCTAACCCTTCCCCTGATT CTTCCTCAGATCTCCCACACATCGTTCTCCAAGTCCTCGATCTCAAACCTAGCGGCAACAGATTCATGTTCAATGCTAGTGATGGAAAATTGAAGCTGAG GGCGATTCTACCTTTCAATCAAAGCCCTGAGGTACACTCTGGAAATATTCAGAATCTGGGTCTTATTCGAATCATCGATTACACTCTCAACGACATTCCC AACAAATCTGAGAAATATCTTATTGTAACGAAATGTGAACCTGTTTCACCCGCGCTTGAAGCGGAGATTAAGAGTGAGGTCAACACTGTAACCGCTTCTT CTGTTGGCATTGTTTTGAAGCCAAAGCAGGAAGTGACGGCAAAATCTGCGGCTCAGATTGTACAAGAACAACATCATAATGTGACTCGTACTGAACGGAA GGCTGTGTCGCGGAGGGTGAATCCCCTTGTATCATTGAATCCTTACCAGGGTAATTGGACAATCAAGGTTAGTGTTACAAGCAAAGGGAACATGCATACT TATAAGAATGCTAGAGGAGAAGGTTGTGTCTTCAATGTGGAGTTGACTGATGAAGATGGCACTCAGATTCAAGCAACCATGTTTAATGATGCTGCAAGGA AATTTTATGACAAGTTTGTTTTGGGAAAAGTTTATTACATTTCAAAGGGGACATTAAAAGTTGCTAATAAACAGTTTAAAACTGTTCACAATGATTATGA AATGACACTGAATGATTATTCTGAGGTGGAAGAGGTGGCTGATGAAGCAGCTTTTGTCCCTGCAACAAAATTTAACTTTGTTCCGATTGATCAGTTGGGT CCTCATGTTAACAAGAATGAGCTTGTTGATGTAGTTGGAGTTGTTCAGAATGTGTCTTCAACCATGAGCATTAGGAGGAAGAGCAATAATGAGACTGTTC CAAAGCGTGACATTACTATTGCTGATGATACTAAGAAGACAGTAGTTGTATCATTGTGGAATGAGCTTGCAACTACCATAGGGCAAGAGTTGCTTGACAT TGCTGATCAATCTCCAATAGTTGCTATCAAATCCCTCAAGGTTGGGGATTTCCAAGGTGTTTCTCTGTCAGCTATAAACAAAAGTGTAGTTCTAATAAAT CCAGACTTACCTGAAGCAAGTAAACTCCGATGCTGGTATGATTCTGAAGGCAAGGAAGCTGCAATGGCCTCTGTGGGTGCTGGGTCAAGTCCAGCAAGCA AGAATGGAAACAGATCAGTGTACTCTGATCGTGTTTCACTTTCTCAGATAACTTCAAACCCATCCTTGGGGGAGGACAAGCCTGCATTCTTCAGCATTAG AGGATACATAAGCTTTATCAAGCCTGAGCAGGCAATGTGGTACCGTGCATGCAAAACTTGCAACAAGAAAGTTACTGAAAGCATTGGTGCTGGGTATTGG TGTGAAGGCTGCCAGAAAAATGATGACCAGTGCAATTTAAGGTATATTCTGGTTGTAAAAGTTTCTGATGCAAGCGGGGAGGCTTTTATCTCAGTCTTCA ATGAGGAGGCTGAGAAAATTGTTGGATGCTCTGCTGATGAACTTGACATCCTTAAATCACAGGTAGCATAAGTTACCCATTTCTTAATAAATTCATTGAA TAATTGGGTGGGAATATGATCTGTTGTTAATTTCAGGATGGGGAAGATAGTCCTTATCAAATGAAATTGAAACAAGCTACTTGGGTTCCACATCTTTTGA GGGTTAGTGTTACTCAGAATGAGTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_182153; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_530244
| Blastp | Replication protein A 70 kDa DNA-binding subunit B from Arabidopsis with 66.97% of identity |
|---|---|
| Blastx | Replication protein A 70 kDa DNA-binding subunit B from Arabidopsis with 66.48% of identity |
| Eggnog | DNA replication(COG1599) |
| Kegg | Link to kegg annotations (AT5G08020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451738.1) |
| Pfam | Replication factor-A protein 1, N-terminal domain (PF04057.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |