| Id Trinity | TRINITY_DN51079_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_529814 |
| Sequence | CTGTGATTAGTTAGGAGCTTAGGGTTACTTCTAGTATGTTTCTTGATTCTGGTAAGAGTTTGCTTATAGGAAAATATTTGATGAGCAACTATGCTAGATT AGTAGTTTGTGTTGTAAAATGTCAAACTCTGTTGTATGAGTTTTACCTTCTAAATTATGGGCTACACTTTAGTATCTCATAAAATAATATCTTGTAGAAC CAGTTCTGTAGATTTCGTGGCTAGAAATTTTAGCCATTTATCAATAATGTAAGGTAAAATGTTTGCACTGTGGCCTGGTGGCTATTGAGCATGTCTCATG GGTTTGATACACGGATTTGAATCTGAGGCACAACATTTGTAGGGTGAGGCTCGGCGCAATGGTATGGTTGCTTTCATTGTGACTCGGAATTCATGAGTTC TAATCCTGGAAAGAACCTTCCTGCTTGTGGGGTAAGGTCGTGTACGTATACCTTCCCCAGTCCCTACTAGGAGCATGGGGGTAATCTTAATGAAGCTGTC AATGCACATTTTAGTGAAGGAGACAGAAATTTGTCAACCAGTGTGAACACTACCAATGTTGCTGTTCCAGAAGATGATTTCATGGATATCGACGATGAAC TTGATGCAGAAATCCTCAGACCTCCATCACATTTGTCTTCAGACAGAAACAATCCATTTTCTCTTCTTGAGTCAACAATTGGGAGGGGTATATTTGATTC ATATTCTCATCTATCAAACCAACCACCATTTGTTACGCATCCAAGAGAGGTAAGGGAGATTCCCATTGAGGTTAAGGATGGTAGTCAATCCACTCCTCAA GCTAGCCATCATGCCCCAACTATTGAAGATGTCACCGGGACTGTCCAAGCTGATGGTCCAGATATTCATGGGACTGTCATAATCAATGAAGATGATGATA ATACTCCACCTGTCCAGACTGCATATCAGAATGAACAAAACCATGAGACGTTGGCTGATACTTCACTTGCCAGAAGTGCAAGACCTAGTGCTCCTGATTT TGAGAATTTACCAGATTATAGCAATGACATAGAAGAAGAAATGATCCGTGCAGCTATTGAGGCATCTAAACGGGAGGCTGAGGAAAATTATCCAAATCAC AGTCCTGACAGACAAATTGATTTAAGTGAATCTGGGCCCCAGCCCAGGCAATCATATTTGGAGGATCCTGAGCTTGCTCATGCAGTTTCATTGTCACTGA AGACAGCTGAGCAAGAGAAAGCAGTGCACATTCAAGGAGATGTTGGAGCACCAGCAGTAGGGCCCACTAAATCATCTGAGGTGGAATTGGGAGATGTAAC ACCCAACAGAAGACTGCAGACAGGAAGCTCATCCTTCCAAGATGAAGGTGAAGACTTAGAAGAGCAACCGCTGGTTAGGAACAGGCCTAGACTTGCATCC TTTGACTCCACAGAATCAGCCAACAATGTTGAAGTTATCGAGACTAGCACACTGCCAAGCACAGGACCTTGGGATGATAGCAATCCTCCTCAGCATGATC AGAATTCCTTCCCTGATGAGTGGGGTGGCATTTCTTCTGAGGAGCACGATGAAGCAGTTATGCTCGAGGCTGCAATGTTTGGTGGAATTCCAGAAGGGAG TGGGCACAATTATGCTTACTTACCACATGAGTTCGTGCAGAGTAGGGGTATCTATCCTCGGCCAACACCTCGTCCACCTTCACCATCATTGACAGCTCAA CGCTTGATAAGGGAACAGCAGGATGACGAATATCTTGCAGCTTTACAAGCAGACAGAGAAAAAGAACTGAAAGCTATAGAAGAAGCCGAGGCTGCTCGTG AAGAGGAAAGGCGGAGAGAGGAAGAATCTCGCAGGAAATTACAGGAAGAGCAGGAATTGGAGACACAGTTAGCAGCAAAAGAAACCTTTCTACCGCCTGA ACCATCCTCTGATGGTGAGAATGTTGTGAACTTACTCGTAAGAATGCCAGATGGTAGCCGTCGTGGACGCCGGTTCCTTAGATCTGATAAACTACAAGCT CTTTTCGACTTCATAGATATCGGTAGGGTGGTGAAACCAGGCAGTTACAGACTGGTGAGACCGTATCCTAGGCGTGCTTTTAGTTATGAAGAAAGTAAAT CGACTCTAGAAGAACTTGGTCTGACCAACAAGCAAGAAGCCTTGTTTTTAGAGTTGATCTAAATGCCCTGGTGCAAATTTCTAAAGAACACTTTATTGGA GTTTAGTTTACTAAATTATGAATCCATTCAGACGTTGAAATGGGATTTCAATTTGGTTTGTGCTGTTTAGATAATGTTATATATTTTGTTCTACATGGAA GGACAAAATCACATTTACAAAACCATCGTTTACTATGTTGTGATGAATCTTCATGGGCATGTTTTGCATCTTATCTAGTTGCAAACTAAGGTTATCTCAA ATTGAGGTTGAAAATAAGGTATTAATTAGGGGATTTTTTAAAGTGGTATTTTGAAAATTAATATCTGCACATGTTTATCTTAAAACCAAGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_182188; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_529814
| Blastp | Plant UBX domain-containing protein 8 from Arabidopsis with 51.15% of identity |
|---|---|
| Blastx | Plant UBX domain-containing protein 8 from Arabidopsis with 49.08% of identity |
| Eggnog | Fas associated factor family member 2(ENOG410XSFS) |
| Kegg | Link to kegg annotations (AT4G11740) |
| CantataDB | Link to cantataDB annotations (CNT0002280) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421721.1) |
| Pfam | Ubiquitin interaction motif (PF02809.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |