Id Trinity | TRINITY_DN51079_c2_g1_i11 |
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Name Transcript | Ll_transcript_529839 |
Sequence | GTGGTTACTGCATTGGCTACACAGAACTCAGCATTTTCCCTTCTAGTGATTGTCAAATCTGAAAGGCAAAATTGTGGTCATTCTAGACTGCAGACAGGAA GCTCATCCTTCCAAGATGAAGGTGAAGACTTAGAAGAGCAACCTCTGATTAGGAGCAGGTCTAGACTTGCATCTTTGGGCTCCACAGAATCGGCCAACAA TGTTGAAGTTATTGAGGCTAGCACAGTGGCAAGCATAGGACCTCAGGATAGCAGCAATCCTCCTCAGCATGATCGGAATTCATTCCCTGATGAGTGGGGT GGCATTTCTTCTGAGGAGCATGATGAAGCAGTTATGCTTGAGGCTGCAATGTTTGGTGGAATTCCAGAAAGGAGTGGGTACAGCTATGCCTATGCACCAC ATGAGTTCATGCAGAGTAGGGGCATCTTTCCTCGCCCAACACCTCGCCCACCTTCACCATCACTGACAGCTCAACGCTTGATAAGGGAACAACAGGATGA TGAATTTCTTGCAGCGTTACAAGCAGACAGAGAAAAGGAACTGAAAGCTATAGAAGAAGCCGAGGCAGTTCGGGAAGAGGAAAGGCGGAAAGAGGAAGAA TCTCACAGGAAATTACAGGAAGAAATGGAACTGGAGACACAGTTAGCGGCAAAAGAAGTCTCTCTACCACCCGAACCATCATCAGATGATGAGAATGCCG TGAACTTGCTTGTAAGAATGCCAGATGGCAGCCGCCGTGGACGCCGATTTCTTAGATCTGATAAACTACAGTCTCTTTTCGACTTCATAGACATTGGTAG GGTGGTGAAACCAGGCAGTTACAGACTGGTGAGACCGTATCCTAGGCGTGCTTTTAGTTATGAAGAAAGTAAATCGACTCTAGAAGAACTTGGTCTGACC AACAAGCAAGAAGCCTTGTTTTTAGAGTTGATCTAAATGCCCTGGTGCAAATTTCTAAAGAACACTTTATTGGAGTTTAGTTTACTAAATTATGAATCCA TTCAGACGTTGAAATGGGATTTCAATTTGGTTTGTGCTGTTTAGATAATGTTATATATTTTGTTCTACATGGAAGGACAAAATCACATTTACAAAACCAT CGTTTACTATGTTGTGATGAATCTTCATGGGCATGTTTTGCATCTTATCTAGTTGCAAACTAAGGTTATCTCAAATTGAGGTTGAAAATAAGGTATTAAT TAGGGGATTTTTTAAAGTGGTATTTTGAAAATTAATATCTGCACATGTTTATCTTAAAACCAAGGC BLAST |
Tissue | pods |
Gene name | LI_gene_182188; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_529839
Blastp | Plant UBX domain-containing protein 8 from Arabidopsis with 58.45% of identity |
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Blastx | Plant UBX domain-containing protein 8 from Arabidopsis with 58.45% of identity |
Eggnog | Fas associated factor family member 2(ENOG410XSFS) |
Kegg | Link to kegg annotations (AT4G11740) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424336.1) |
Pfam | UBX domain (PF00789.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |