Ll_transcript_529820

• Id Trinity: TRINITY_DN51079_c2_g1_i4
• Name Transcript: Ll_transcript_529820
• Sequence: GTAAACTTTGATTAAAATATTTCATTGAATCCAGCATAAAAAAGAAAAGAAGTGAAGAAATAGTTAGTGAAATAGCGGAAAAATAAACAAGTGCCATTTA CTTGGCCAACAAGTGGAGTAAGCAACACTTTCATTTCTCTCTCTCTCTATGAATCTCTCTCTCTCTCTCTCTCTCTCTCTAAATCTTGAAACTATCCAAC TCTATATATTTTGATATTTCACAAAAAATATCTGTCTACTGAATTTGTGTGTTTTTGGTACAATTCTGATTTCGATGGCAACTCTTAATCGAGACACAAT TGAGACATTCATGACCATCACCGCCTTATCTGAACCAATCGCAATTCAAAAACTTCAGGAGCATGGGGGTAATCTTAATGAAGCTGTCAATGCACATTTT AGTGAAGGAGACAGAAATTTGTCAACCAGTGTGAACACTACCAATGTTGCTGTTCCAGAAGATGATTTCATGGATATCGACGATGAACTTGATGCAGAAA TCCTCAGACCTCCATCACATTTGTCTTCAGACAGAAACAATCCATTTTCTCTTCTTGAGTCAACAATTGGGAGGGGTATATTTGATTCATATTCTCATCT ATCAAACCAACCACCATTTGTTACGCATCCAAGAGAGGTAAGGGAGATTCCCATTGAGGTTAAGGATGGTAGTCAATCCACTCCTCAAGCTAGCCATCAT GCCCCAACTATTGAAGATGTCACCGGGACTGTCCAAGCTGATGGTCCAGATATTCATGGGACTGTCATAATCAATGAAGATGATGATAATACTCCACCTG TCCAGACTGCATATCAGAATGAACAAAACCATGAGACGTTGGCTGATACTTCACTTGCCAGAAGTGCAAGACCTAGTGCTCCTGATTTTGAGAATTTACC AGATTATAGCAATGACATAGAAGAAGAAATGATCCGTGCAGCTATTGAGGCATCTAAACGGGAGGCTGAGGAAAATTATCCAAATCACAGTCCTGACAGA CAAATTGATTTAAGTGAATCTGGGCCCCAGCCCAGGCAATCATATTTGGAGGATCCTGAGCTTGCTCATGCAGTTTCATTGTCACTGAAGACAGCTGAGC AAGAGAAAGCAGTGCACATTCAAGGAGATGTTGGAGCACCAGCAGTAGGGCCCACTAAATCATCTGAGGTGGAATTGGGAGATGTAACACCCAACAGAAG ACTGCAGACAGGAAGCTCATCCTTCCAAGATGAAGGTGAAGACTTAGAAGAGCAACCGCTGGTTAGGAACAGGCCTAGACTTGCATCCTTTGACTCCACA GAATCAGCCAACAATGTTGAAGTTATCGAGACTAGCACACTGCCAAGCACAGGACCTTGGGATGATAGCAATCCTCCTCAGCATGATCAGAATTCCTTCC CTGATGAGTGGGGTGGCATTTCTTCTGAGGAGCACGATGAAGCAGTTATGCTCGAGGCTGCAATGTTTGGTGGAATTCCAGAAGGGAGTGGGCACAATTA TGCTTACTTACCACATGAGTTCGTGCAGAGTAGGGGTATCTATCCTCGGCCAACACCTCGTCCACCTTCACCATCATTGACAGCTCAACGCTTGATAAGG GAACAGCAGGATGACGAATATCTTGCAGCTTTACAAGCAGACAGAGAAAAAGAACTGAAAGCTATAGAAGAAGCCGAGGCTGCTCGTGAAGAGGAAAGGC GGAGAGAGGAAGAATCTCGCAGGAAATTACAGGAAGAGCAGGAATTGGAGACACAGTTAGCAGCAAAAGAAACCTTTCTACCGCCTGAACCATCCTCTGA TGGTGAGAATGTTGTGAACTTACTCGTAAGAATGCCAGATGGTAGCCGTCGTGGACGCCGGTTCCTTAGATCTGATAAACTACAAGCTCTTTTCGACTTC ATAGATATCGGTAGGGTGGTGAAACCAGGCAGTTACAGACTGGTGAGACCGTATCCTAGGCGTGCTTTTAGTTATGAAGAAAGTAAATCGACTCTAGAAG AACTTGGTCTGACCAACAAGCAAGAAGCCTTGTTTTTAGAGTTGATCTAAATGCCCTGGTGCAAATTTCTAAAGAACACTTTATTGGAGTTTAGTTTACT AAATTATGAATCCATTCAGACGTTGAAATGGGATTTCAATTTGGTTTGTGCTGTTTAGATAATGTTATATATTTTGTTCTACATGGAAGGACAAAATCAC ATTTACAAAACCATCGTTTACTATGTTGTGATGAATCTTCATGGGCATGTTTTGCATCTTATCTAGTTGCAAACTAAGGTTATCTCAAATTGAGGTTGAA AATAAGGTATTAATTAGGGGATTTTTTAAAGTGGTATTTTGAAAATTAATATCTGCACATGTTTATCTTAAAACCAAGGC
• Tissue: pods
• Gene name: LI_gene_182188;
• Additional information: details;

Expression of Ll_transcript_529820

FPKM

• PAB: 2.5
• PNAB: 12.7
• PS1: 15.3
• PS2: 6.8
• PS3: 14.6
• PW1: 8.4
• PW2: 6.4
• PW3: 11

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_529820

• Blastp: Plant UBX domain-containing protein 8 from Arabidopsis with 49.11% of identity
• Blastx: Plant UBX domain-containing protein 8 from Arabidopsis with 49.12% of identity
• Eggnog: Fas associated factor family member 2(ENOG410XSFS)
• Kegg: Link to kegg annotations (AT4G11740)
• CantataDB: Link to cantataDB annotations (CNT0002280)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421721.1)
• Pfam: UBA-like domain (PF14555.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;