Id Trinity | TRINITY_DN51083_c2_g1_i8 |
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Name Transcript | Ll_transcript_528667 |
Sequence | CTCTCCTTTACTCTCACTCTCACATGGCCACAATAAACGCCATCTGTTACAATCCCTCTCCCAATTTTATCCCCACTAATATCTACAAACAAAAAACACA CTGCAAAATTTCTTCATTTTCTCTTTGTTTTTCTGCTTCAAGATCAAGCCTTTGCGGTGGGTTTATTCCAAAGACAACTACTTTGGGAAGAAATAGACTC TGGGTATCAAAAGCCATGAGTGATTCTGCTTTCAGTGATGACAAGAGCAATGTAAACATTCAAGTGTTTGAACAACAAGCTTTCATTGATGACTCAACCC AGTTTTGCGCCAAGTTTTTGCCCCCTCAGCTCGAATCAAAGCTCAATCGTCTGGTTTGAAATCTTTCTCACAATATTTTCTGCATTACAGTTCTTACTTT CCACTCATATCATGTTCCATAATTCCGTAGTGCATATTCCTAAACTGCTTAGTGTAAGTGTGTAACACAGGTTGAGCAAATACTTGGGAAAATTTCGTCT ACATTTTATGTTATTTTTCAAAGTACAATGGTTCTATTTGACGTGGTTCCTGAAAATGCATGCCAAGATATTGAATTTGTTATTAGCAATGAATGTTCAT CAATCACTCACAAATGGACTAATAGTATGTAAAAATTGTTTACCATTCTGAATCCAGAGATGCAATATCATGTAGAATCAAATCAACATTGGAGTATTTG CCTTAACAAATCTAGAATATTCCTTGGCCTCGATGGTACTGTCTCCTTTTAGGTGCAGTCATTAAGTAAAATTGTATGAATAAAAGTTATTCCACAAGCA TGTCACAAGATAAATCTTTTATACTTGAGTGACTGAGTTTAAGATGTGCAGGTTACTTATATTAAAACTGACATTACAATAAGCTTCTCGAGGAATGGTC ACTGAAAAATAAGTCAACAATAGGTTTAACTATAAGTTCATGAGCTGATGGATTTGGCTCTGTTGTTTACACTTTACAGAGCAGGTGGATAGTAACTGTC CTCATGGGTTGTTTCATTCTTTGGAGGCATGATGCAGAAGCCTTATGGTTTGGCGCAGGAGCTATTTTGAACGTTCTGCTTTCTGTTTGGCTCAAACGTA TACTAAACCAGGAAAGACCTACAACCTTGAAATCTGACCCGGGGATGCCGTCTTCGCATGCACAATCAATATTCTTTGCTGCCTTCTTTGTTATTTTATG GAGTGTAGGACGGATTGGGCTAAATGTATTCACCATTTTTGTCAGTGGACTGGTCTTGGCATCTGGTTCTTTTTTCTCATACTTAAGGGTGTCTCAAAAA CTTCATACAATGAGCCAAGTGGTTGTTGGAGCTGCTATTGGGTCCATTTTCTCTACCTTGTGGTATTGGCTCTGGAATGCTTTTCTGCTGGATGTATTCA TATCCTCTATATGGGTGAGAATCGTTGTTGTTTTAGGGTCTGCAGGACTCTGCTTAGGTTTCTTTATATTTACAATTCCCCATTGGCTTCAAAATGAATA ATACTTTACCTAAACTTGTCATACCATCATTGAGTCACTATTGACATCTCATTTGTTTCTTACAACATTGGATACTTAATAATGGCTTGGTTATTAATTT ATTATCAACTGTGACTTAAACCCCTATTGTGCTACTAAACTTTTGTTTTTATCATTTTATAGCGTGGAGGAAATATTATAGTGTTCAAGAAAGTAATGCC ATAGGGTCTTGGCCTTTGTTCCACTTCTTTTGATATTGGTTTAATCTCAATTTAACATTAGGGCAAGCTTGGAAACACAATTTAATTAAACATATGTCA BLAST |
Tissue | pods |
Gene name | LI_gene_182212; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_528667
Blastp | Lipid phosphate phosphatase epsilon 2, chloroplastic from Arabidopsis with 52.73% of identity |
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Blastx | Lipid phosphate phosphatase epsilon 2, chloroplastic from Arabidopsis with 50.53% of identity |
Eggnog | PAP2 superfamily(ENOG41128XY) |
Kegg | Link to kegg annotations (AT5G66450) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444786.1) |
Pfam | PAP2 superfamily (PF01569.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |