Ll_transcript_528671

• Id Trinity: TRINITY_DN51083_c3_g2_i1
• Name Transcript: Ll_transcript_528671
• Sequence: AGGGCATTATGGTCCACGGATGATGGGCATAATCGTCCATAGATGAAGGGTATTTATTCTTCTCCTTCTTCATTGAATTCAATTGTTGTAGTTGTTTCAG CATTGATTGAAGTGTAGATGGCTGTTCCCATCGAAGAAGCCATTGCAGCTCTATCCACATTCTCTCTAGAGGATGATCAACCTGAAGTTCAAGGACCTGG AGTTTGGGTATCATCTCAAAGATCTGCAACTCAGAGTCCAATCGAGTATACTGATGTTGCTGCTTATCGATTATCGTTATCCGAGGATACTAAAGCTCTT AATCACCTTAATGCCCTTACTCATGACGGAAAAGAGATGGCGTCCGTGCTTTACACGTATCGTAGTTGTGTCAAAGCGCTTCCTCAGCTTCCGGATTCTA TGAAGCAAAGCCAAGCTGACTTGTATTTGGAAACATATCAAGTTCTGGATTTGGAAATGAGTCGTTTGCGTGAAATTCAGCGATGGCAAGCATCAGCTTC CTCTAAATTAGCTGCTGACATGCAACGTTTTTCTAGGCCTGAGCGCCGCATTAATGGCCCAACTATTTCTCACTTATGGTCCATGTTGAAGTTACTTGAT GTTTTGGTGCAACTCGACCATCTTAAAAATGCTAAGGCAAGCATACCTAATGATTTCTCATGGTATAAAAGGACTTTCACACAAGTCAGTGGTCAGTGGC AAGACACCGATTCAATGAGGGAGGAGTTAGATGATTTACAGATCTTCTTGAGCACAAGATGGGCTATTTTGCTGAATTTGCATGTTGAGATGTTCCGTGT GAACAATGTAGAAGACATTCTTCAAGCTCTTATAGTCTTTGCAGTCGAGTCTTTGGAGTTGGACTTTTCACTTCTCTTTCCAGAGCGTCATACTCTTTTG CGCCTTCTGCCTGTTCTTGTTGTCCTAGTGACATCATCAGATAAGGATAGCGAGTCTTTGTACAAGAGGGTGAAAGTCAACAGACTGATCAATATATTTA AGAATGATGCAGTCATTCCTGCATTTCCAGATCTGCATCTGTCTCCTGCTGCAATTTTGAAGGAATTATCAACTTACTTCCCAAAGTTTTCTTCCCAAAC ACGGCTTCTCACCCTTCCAGCTCCTCATGAGCTCCCTTCTCGTGAGGCACAAGAATATCCTCCAAAGTTTCTTATGTTTTAATTGATAATTTGATGCTGA TCTGTTATTATTGAGTAAATGTTCCATTTCCTTGACCTGTCCTCTATCAAGAAATTGACTTTTTTTTTCATGTCTTTGAAGCTTACTATTAATCACATAC ACTGCAAATAGATGCAATGTGACTGGCATCTAAAAAAGTATGGCCCAGTACACGAGGCTCCCACCTAGTGGGGTCTTGGTAGAGTAGATCAATAGATGTA TGCAATTGTAAAAGATTGAAAAAACAATACTAAAACAGAAAGATAGAAAGATAGGAAATAGAATCAGTAACTTTTCTGATTCTCATTGAATGTAATTGAA TGAATCCTGAATACAAAGATATATCCCTATTTATAACAAGGGAAAACAGAAAAGAGGATAACTGAATCAGTAGCTGAATTATTCAGTTACTGAAAACAGA ATCCAAACAGAAAACTGAATCCTACCCTAAACAGAAAACTATTCAGATAAGCATTATTGAAACACAGTTTCATTTTAATGCTTGATCTCTAATAGCAATC TTACTCACGCAAGTAAAGAGAATGTTTTCAGGATTTGAACTCGTGACCGCCAGGCCACAAGGCAAACAACCTTACCGTGCCAAGAGTACTCTGTAGTTTA GGATATTGAATTGCATATTTTCTGTTCATTGAAGGCAAACAACCCAAGGAGGATACTTTGGTTCTTTCCATTTATGATCATTCATCATTAAAAAGTTTAG GGGAAATTATATCGACCTCTATTGAGGTTTGACTTAATTACATTTGACATCCTTCATGTTTCAGAAATTGCCGGACTTCCTTGAGGTTCGTGTTGTAATT ACACTTACACCCTTGAGGTTTATATTGTCATTACATATCCTCCTAGACGCTTGCATTGTCATTACAAGCACACACCCTTTACAAAATAAATCTTAATGGA GGTCTGTACAATTTCTAAAACAAGATGGGTGTAAGTGTCTTCTTGCTATCTCTTTAGAATGTAGCCTTGACATGAAACACGTATCAGAGGCATTATCTAA TCGTCAACCATATTGGAGCGATACGTGCAGAGCATGATGATTTCACAATTCGTTATGCTTCAGCAATGAATCAGCTGTTATTGTTAAAGTCCACTGATGG TTCTGATGTTGATTGGAGCAAAGAAGTCAAGGGGAACATGTATGATATGATTGTTGAAGGTTTTCAGCTATTAAGCAGATGGACCACGCGTGTCTGGGAA CAATGTGCTTGGAAATTTTCACGTCCTTGCAAGGATGCTTCCCCATCATTCTCTGACTATGAAAAGGTGGTACGATATAATTACAGTGCAGAGGAAAGAA GAGCACTGGTTGAACTTATGAGCTACATAAAGAGTGTTGGGTCTATGATGCAGCGTTGTGATACACTGGTTGCTGATGCTTTATGGGAAACAATACATGC CGAGGTCCAAGATTTTGTCCAGAACACATTGGCTACTATGTTGCGGACTACCTTCAGAAAGAAGAAGGACCTCTCTAGGATTCTTTCTGATATGAGGACT CTTTCAGCTGATTGGATGGCTAACACAAGCAAGTCAGAATCTGAGTTACAGTCCTCACAGCATGGAGGTGAAGAAAGCAAAGCAAACATATTTTATCCAA GGGCAGTTGCCCCTACTGCTGCTCAGGTGCACTGCTTGCAGTTCTTAATATATGAGGTGGTTTCTGGCGGTAACCTTAGGAGGCCGGGTGGACTCTTTGG GAATAGTGGCTCAGAAATTCCAGTTAATGACTTAAAACAGCTGGAGACATTTTTTTACAAGCTTGGTTTTTTCCTTCATATTTTAGACTACTCAGTGACT GTAGCAACATTGACGGATCTTGGTTTCCTATGGTTCAGAGAATTTTACTTGGAGTCTTCGCGTGTCATTCAGGGTTCTATTTTCCCTTTAGTTTCCAATT GAGTGCTCTCTTCCCTGGATGTTGGTGGAATGTGTACTTGAGTCACCAAAGTCTGGTCTTCTTGAGAGTGTCCTGATGCCATTTGACATCTATAATGACT CAGCTCAGCAAGCTTTGGTGTTGCTGAAGCAACGGTTTCTGTATGATGAAATTGAGGCTGAGGTGGATCATTGTTTTGATATATTTGTTTCAAAATTGTG TGAAACTATTTTCACATATTACAAAAGTTGGGCAGCAAGTGAATTGCTTGACCCGTCTTTCCTCTTTGCCTCAGACGATGCAGAAAAGTATGCTGTGCAG CCTATGAGGTTCAATATGCTGCTAAAAATGACTAGAGTGAAGCTACTTGGAAGGATGATTAATTTGCGAAGTTTGATCACTGAAAGGATGAACAAAGTTT TCCGCGAAAATATTGAGTTTCTGTTTGATCGTTTTGAGTGTCAGGATCTGTGTGCCATAGTGGAATTAGATAAGTTGTTGGGTGTTTTAAGACATTCTCA TGAACTAATATCGAGAGATCTTTCCGTAGACTCTTTTAGTCTCATGTTGAATGAGATGCAAGAGAATATCTCTCTTGTGTCATTTTCTAGTCGACTGGCC TCACAGATTTGGTCTGAGATGCAAGGTGACTTTTTGCCAAATTTCATCCTCTGCAATACTACACAACGTTTTATCAGATCATCAAAGGCTGTTCCTGTTC AAAAACCCTCCATACCCTCTGCTAAGGCTAGTTTCTATTGTGGTACTCAAGATTTGACTTCAGCGCATCAAAGTTTTGCACGATTGCATAGTGGGTTCTT TGGATTACCTCACATGTTTTCTATTGTTCGAATTTTGGGATCCCGGTCATTGCCTTGGCTTATTAGAGCCCTCCTTGATCACATATCTAACAAGATAACT TCACTTGAGCCAATGATCACAGGATTACAAGAATCCCTTCCAAAATCAATAGGACTTCTGCCTTTTGATGGAGGTGTGACAGGTTGTGTGAGACTTGTTA AAGAACATCTTAACTGGGAGACAAAGTCGGAGCTGAAATCTGAAGTTCTTCATGGCATAAAAGAGATTGGAAGTGTATTGTATTGGATGGGGCTTCTAGA TATCGTGATGAGAGAAACTGATACTATGAGTTTCATGCAAACTGCTCCCTGGTTGGGCTTTCTTCCTGGAGCAGATGGGCAAATATTAACTTCTCCAGAT GGTGGAGACAGCCCTGTTGTCAGCCTCTTTAAATCAACAGCTGCTGCAATGCTTTCATACCCTGGCTGCCCGTCTCCTACATCTTTTCAAATCATGTCAA AACAAGCAGAAGCTGCAGATCTTTTATATAAGGCAAACTTGAATACTGGAAGTGTGCTGGAGTACGCACTTGCATTCACAAGTGCTGCATTAGATAAATA TTGTAGTAAATGGAGTGCTGCGCCCAAGACGGGCTTCATTGACATTACAATTTCTAAAGATTTCTATCGAATATATAGTGGCCTCCAAATTGGGTACTTG GAAGAGTCTGCACAAGTAGCATCAAACAGTCATGAAAGGCTGGGAGATTCAGTGGCTTGGGGAGCCTGCACCATAATTTATTTGCTTGGCCAACAGTTCC ATTTTGAGCTCTTTGACTTTTCATATCAAATCCTCAATATCGCCGAAGTGGAGGCTGCATCTTCCGTTCAAACACACAAGAACTCAAACTTTGCTGTTCA GGGATGGGAAACCTTATTGGAAGGGATGAAAAAAGCAAGGAGATTAAATAACCATGTGTTCTCTATGCTTAAAGCGCGATGCCCCCTCGAAGAAAAGACA GCATGCGCTATTAAGCAAAGTGGTGCTCCGCTGCATCGTATCAAGTTTGACAACACGGTTTCAGCATTTGAGACACTGCCGCAGAAAGGTTCTTAAATGT GTCAATCTACTTATATGCTTATATGCGCCTATATGCTTATGCTCCTTAACAACTTTGCCTCTCATAAAGTAATGTTTGACATAAATGTTGACACTGTCTG GTGTGTGGTTTGTCCTCTTTGTGGTGTATATGTAACATTGTTATTGTTGTTGTTGTTATGAAATGTGAAGAGTGAATATGTTACATTGTAGTCAGGTAAT GTTTCATGAGCAATGTCGAAAAGAGATATAATATTATTATGTCTGTCCTTCGGAAATGTGGAAAGTAGAAC
• Tissue: pods
• Gene name: LI_gene_182214;
• Additional information: details;

Expression of Ll_transcript_528671

FPKM

• PAB: 0.2
• PNAB: 1.1
• PS1: 0.3
• PS2: 0.6
• PS3: 0.8
• PW1: 0.4
• PW2: 0.9
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_528671

• Blastp: Protein PIR from Arabidopsis with 77.76% of identity
• Blastx: Protein PIR from Arabidopsis with 78.08% of identity
• Eggnog: cytoplasmic FMR1 interacting protein(ENOG410XPKW)
• Kegg: Link to kegg annotations (AT5G18410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418762.1)
• Pfam: Cytoplasmic Fragile-X interacting family (PF05994.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;